AMCG00000482


Basic Information

Item Value
gene id AMCG00000482
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15461846 ~ 15479049 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000482
CTTCCTAATGGGTTCcaacacaacagaaaacacTGCGTTGATCCTTAATCCAGACAACTCTTCTGTCCTATGGAGCAACCAAACAAATGCAACCACTTGCCCCACTGATGGCTGGGACTGGCTATATGCCATGCAACCTGTTTACATGGCAATCATTTGTGTGCTGGGAATCATAGGGAATGCATTTGTCCTGTGCGTTTTTTGTTTCCACCGTAAACAATGCACAGTACCAGAGGTATATCTTGGTAACCTCGCAGTTGCAGACTTGTTGATGGTGTCTTGTCTTCCTTTCTGGGCCGTGACTGTAGCCAATCATTTCAACTGGCAATTTGGGAGTTTCTGTTGTCGGCTCATCAATGTTGGCATCAGTATGAACATGTACTGTAGCATCTATTTCCTGGTGCTGGTGAGTATCGACCGCTATCTGGCACTGGTAAAGACCATGTCACATGGCAGACTTCGGAGCGTCTCTTGTGCCAAATTGAGCTGTCTTGGAATTTGGGTGTTTGGTTTCCTCATGAGCACCCCCATCATGCTATATAGAAGAGTAGAATACCTTGAAGAGTATACAATTAATGCCTGCTATATTGATTATCCTACCTTGAAATGGGAAATATATCAAAACATTGTGCTCACCTTTAGTGGGTTCCTAATCCCCTCATTGATCATTTCATACAGCACTTTCAAGATCATTGTTGCCCTGAAGAATAAAACAATCTCAAAGTTCAATGCGTTCAACACGGAGAAGAAGGCAACTTTGCTCATCCTGACGGTGCTCCTGGTCTTCTTCCTATGTTGGATACCGTTTCACGCTGTGACATTTCTAAACATCTTGTTTAAATCCAAAGTTATAACTGGGTGTCACTGGGAACACTACATTGACATAAGCAACCAGTTCTCCACATATCTGGCTTACAGCAACAGTTGTTTCAATCCTGTGCTATACGTCATCGTGGGAAAGAACTTCAGAAAGAAGGCCAAAGAGCTGCTAATCTACCCAATGATTGCTAACACATCTGAAGGTAGTCTTCCAACCACAAGCCCAGAGAGTTTCTCAAACAACAGCCTAATGGATTTGAGTTCGTGCCCTTCATCCAATGCATGGGAATGGTTATATGCCACACAACCTGCATACATGGCGGTCCTTTGTATTTTGGGCACAATTGGCAAtctgtttgtcttgtgtgtcATGTGCTTCCACCGGAAACAATGCACCATAGCAGAGATCTACCTCAGCAACCTGGCGGCTGCAGATCTGGTGATGGTGTCCTGTTTACCCTTTTGGGCTGTGACTATAGCCGATGAGTTTAACTGGCCATTTGGAGGATTGCTGTGCCGACTTGTCAACGTGGCAATCGCCATGAATCTGTATTGCAGCATTCTGTTTCTGGTCTTGGTCAGCATCGATCGATACCTGGCACTCGTGAGACCGCTGTCTACAAGCCGAATGAGACGACCGGTGTTGGCAAAAGTGATCTGCCTTGGCATCTGGACTGTGGGCTTCCTTCTGAGTTTACCAGTCCTGCTGTATCGCTCCGTGAAGTACTTCCCTGAGTTTAACACCACAGCATGCTACTTGGCCTACCCTCATGAGGGACTGAAAGTGAAACACAACCTAGTGATGAATATTGTAATGTTCCTGGCCCCTCTTGCGGTGATCTCATTCTGCAGTTATCACATAATCAAAGcattgaacaacaacaaaataagaaaagtttgTGCTATGAGGACTGAGAGGAAAGCTACCCATTTGGTTCTCATTGTGCTTCTggtatttttcttctgttggaCACCTTGTCAAATAATAAGGTTCCTAGACACTCTGTATTATTACAACGCAATTGCAGGTTGCCATTGGGACACCATCCTCGACGTTGGCATCCAAATAACAACCTATTTAGCATATAGTAATAGCGTGCTGAATCCCATCCTGTATGTTATTGTAGGGAAACAATTCAGGAAACAGGCTAAAGAGCTGTTTATAGTGACCTTAAAGGTGAGAGCAAACTGCATGTCTCTGTATGTAGCCTGGATTCTGGCAAGGAATGGGAATAACATGGCTGTCTACCTGGTGAACCTGTCTATATCAGATCTGCTGTACATCATCTCTCTGCCTGTATGGATTGAGCATTCTCTCCAACACTCCGTGGACAGAACGCTGTGCAGTTTCATCGATTTAATCATGAACAACAGTTTTTACGTGGGCGCCTCCTTCCTATGCTGCATCTCCGTGGACCGTTACCTAGCGGTGGTGTACCCGCTCCATTTCAGAACGGTGCGGTCCATCCGATTTGCCCTGTTTATGAGCATCGCTGTGTGGTGTGCAGAGTTGTCTCTCCAGTTGGGATTCCTGTATTATACGGAGTCACTCCTCCATTTTTCCGAAAAAAATATGTGTGAGAAAAAAGACCCCATGGACTCAAAGCAGGCGCATGTGGCTCTGGTCCGGGTCGTGTATGGATTTCTGCTCCCTTTGCTTTTGATGTCCCTTTGCTTTGTGAGAATTATGAGGGCCCTTAATCAAAGCGTTGCCACTTTAGGGAGCGAGAGGAGGAAAATCAAGATGCTGTTGCTGCTATTGCTGTTGACCTATATTGTCTCCTTTGCACCCTACCAGACAGTCATGTTCATAGAGAGCATCTGGGAGCCTGGAAACTGTGCTTTTGCTCAACGAATGGTCAATCCTTACCTGATCGTTGTGGCCCTCACCACAATAAATAGTGTGGTGGACCCAATTCTTTACTGCCTGCTGAGTGAGAgtgcaaaaactgaaatgaagaaGTTGCTCCAATGTATTAAGGTGACGACAAACATGAACATTACCAATCTGACAAATGCTACGTCTATGAGCAACAATGACAGTTGCACCATTGAGTATCATTCTGAAAGCTACTACTTCTTCTGTGTCTATATTATAATCATGCCGATCAGTATTCCGACAAACTTACTTTCCCTGTATGTATCTTACAAACACATTCAGAGGAAGAACGAGCTGGGCGTCTTTCTCTTTAACTTATCACTGTCAGATTTGCTGTACACAATGACTTTGCCAATATGGTTGGATTTTGTTTGGACTGATAAGTGGAAACATGGAGAATATGTATGTAAAGTAAGCGTCTTTCTCatgtacacaaatgtatacagcAGTACTGCCTTTTTAGGTTGCATTTCAATCAACAGATACCTAGCAGTTGTTTACCCTCTCcgattcttgttttttaaaaaagttAAGAGTGCTGTCTACATCAGCATCGTTATCTGGGCAATAGAACTCGTGTTTAACagcctggttttgttttttgaggagACCTATGTAGAATATGATTCCATCCCCATCTGCTTCGACATATACCCTCTGCCCCGACTGAGAGCAAAATTTGAAGTCATCAGATTCTTCGCAGGATTCCTCTTTACGTCAGTGTTGATCATTTTTTGCTGCCAAAGGATATACAAAGCTGTGAAAAGCAACAAAGCCACAGTAGATCAGGAAAAGAAACGGATCAGCAAGCTGCTCTGTGGCATAACAATCATCTTCTTAATCTGTTTTGGCCCATTGCATGTGATTATGATTGTTCGAAGTATACTGGAACCCAATAGCTGTGACTTTGCCAACATACTGTCTCACCCGTATAAAATTGTTCTAGGTCTTTCAGCATTCAATTGTATTGCTGATCCCTTCCTCTACTGCTTCGTAAGTAAAACGGCCAGAAAGGATGTTTTGAGCACTGTCAGcttcttcaagaaaaataaaaacattgcaggGCCTGAGCTGGAGTTCCTACCTCAGAACACAAAA
>TU189478
tgtgtgtgtgtgtgtgtttttcacaatAGATTTGCTACTGCATTGTAAAGTTctccatttttacatttttcattttcaaaactgttatTTGAGCGGTGCAGAAGTTCAGGTTGTAATTTATTTGCTGGAAGAGGCTGGAAACTGCTTTCTATTTGCCAACATTTTTCACATGAGGAGttccaCAGGACAAACATGAACATTACCAATCTGACAAATGCTACGTCTATGAGCAACAATGACAGTTGCACCATTGAGTATCATTCTGAAAGCTACTACTTCTTCTGTGTCTATATTATAATCATGCCGATCAGTATTCCGACAAACTTACTTTCCCTGTATGTATCTTACAAACACATTCAGAGGAAGAACGAGCTGGGCGTCTTTCTCTTTAACTTATCACTGTCAGATTTGCTGTACACAATGACTTTGCCAATATGGTTGGATTTTGTTTGGACTGATAAGTGGAAACATGGAGAATATagcccgctccatctcatccctggcccctaaatggtggagcgacctgcccaccgaagtcaaaacagcagagtccttgacctcattccgacgcttactcaagacgcatcttttccgacagcacttgtaatattagtcctctatccctgctagataacacttcacagtttttattacgctcctcgcgttcttgattgttttcctccttgctccctttcccgaaacccttgtctgtaaccctacatcttgacagcacttagctttcaccgtccaggatgtaggaagtcacttactgtacttgtgtaaattgcaaattggaatttgtaaaatgtattattttgaattgctgttttagctaaattgaatttgtaatgattgatgccttgtacttcactgtatttttgcactttgtttgcacttatgttgtaagtcgccctggataagggcatctgccaagaaataaaaataataataataatgtagataTTAGATTAATATTctgttgaattttaattattcagcagttgaatgttaatagattatgtcttgaatatttgtttaacattaaacCTACAGCGCTTAACACTTTCAAATAGCTTATCGTGATCAACACAGCGCATAAAGAAACGTCTACTGCAGTAGTGCAATGTAACGACACTTAAGGCGTAGTTTAGTTCCCTGTTTTATGAGGTCCAGGAAATGTGGTACCTCAGACACACTGGTTTCCGTTGCCTTGGCAACAGGTAGCCTGTGCAGTATGGTGGAATATGAGAATATCACAGCTGATCATCAATCTCAGGATCCTAACCTGTCAAGTACAATAATAGCTTCAGTTTGACCCTCCATCCCTTTCTTCTGAGTGATTGTCATAGGTGTTACAATCTGtacataaacagaaaacatgtaatttgaCAACTTTTAagaatgttgtattttgttaatacaatgtaattattattcatttatttttaaatgtaattgatcattttttctgaaaatgataGGGAAATTGATTCTTGAGTATGTTCACGTTTCCATACATTTGAATTATGAAATGAAGTGTTGaatttttatacagttttatacacCGATTTGTATACACTGTGTCCTTAAAAATGTCAGCATGTGCTTTCAGCATTTGGTAATTAACCAGAAGCTTTTCTGAATGTACAGACTTGGCTATTGTGcataaatgaaaatgagaagGTAATTGGCTCTCCTATTGTCCCAGCCTCTTTGTTTATTCACAGTTGATGTGACAACCTGTAACTGTCAAAGTTAATAGACCAATCTGATGTTTTGACTTGCCCCCTTTCGTTTCTATTCTATTTTTTCCAAGGAAACAATATCAGCATGAGTTATTTCTGAGTTACAACATACGGGAAAGCTCATGGGTAGACATGGGACACAGTGAGGCAAAGCTTATACTGTAAGTGTTGTGCTGCTTTCTGTTCTCAGAGAGTTCAAAAATAGAAGTGGCAGATTGTCTCCACACTTCCTGTTTGAGGGTTTGAAGGGTTTGCAGCTCTGAGGCAAGAAGTATCACTTAACACATATCACCAATATACATGTATCACTTGTGAAATCTATAT

Function

GO: NA

KEGG:

id description
K03916 BDKRB2; bradykinin receptor B2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000482 True 3796 mRNA 0.44 4 15465324 15479049
TU189478 False 2069 lncRNA 0.37 3 15461846 15467306

Neighbor

gene id symbol gene type direction distance location
AMCG00000481 NA coding downstream 42276 15415530 ~ 15419570 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 50572 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 70896 15383657 ~ 15390950 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding downstream 141631 15311001 ~ 15320215 (-)
AMCG00000476 NA coding downstream 152324 15297877 ~ 15309522 (-)
AMCG00000472 NA coding upstream 137914 15616963 ~ 15619029 (-)
AMCG00000494 NA coding upstream 774088 16253137 ~ 16266313 (-)
AMCG00000493 NA coding upstream 797949 16276998 ~ 16278955 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 1171022 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 1208056 16687105 ~ 16689646 (-)
G150514 NA non-coding downstream 166641 15294219 ~ 15295205 (-)
G150497 NA non-coding downstream 183790 15275963 ~ 15278056 (-)
G150504 NA non-coding downstream 188723 15271396 ~ 15273123 (-)
G150502 NA non-coding downstream 198270 15261387 ~ 15263576 (-)
G150485 NA non-coding downstream 211017 15250625 ~ 15250829 (-)
G150581 NA non-coding upstream 87710 15566759 ~ 15568750 (-)
G150586 NA non-coding upstream 99840 15578889 ~ 15580921 (-)
G150588 NA non-coding upstream 140172 15619221 ~ 15619788 (-)
G150626 NA non-coding upstream 277804 15756853 ~ 15758160 (-)
G150634 NA non-coding upstream 368986 15848035 ~ 15871468 (-)
AMCG00000475 NA other downstream 170591 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 239103 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 323923 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 889414 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 1200514 14245817 ~ 14261332 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 19123 15498172 ~ 15527390 (-)
G150729 NA other upstream 1326146 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1354710 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 2074669 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 2206516 17685565 ~ 17719171 (-)

Expression


Co-expression Network