AMCG00000488


Basic Information

Item Value
gene id AMCG00000488
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16687105 ~ 16689646 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000488
ATGAGAGCTGAAGCTGACCATGTGGAAGCCGGGATTGCCACCACTCAAGCTCACACTCCCCTGGATGCCAGCGGCACGGGCTCTGCTGGCGGGATGGGAGACCACGATCTCCTGACCTGCGGACAGTGCCAGATGAATTTCCCTTTGGGGGAGATCTTGGTTTTTATTGAGCACAAGAAGAAGCAGTGTAATGGCCTCATTAGTGGACCGGGGTGTTATGAGAAAAGCGTGGACAGAGGCAGCCCCCCGCCGCCACGCTCCGAGCTTAGGAAAGTGGTCGAACCAGTAGAAATCGGAATCCAGGTGACGCCTGAAGAGGAGGACGAGAGACTGTTGACTCCCACAAAAGGAATTTGCCCGAAGCAAGAGAACATCACAGCAGGTATGTTTCACTTTGCACTTCTACCGAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000488 True 414 mRNA 0.55 2 16687105 16689646

Neighbor

gene id symbol gene type direction distance location
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding downstream 27428 16650071 ~ 16659677 (-)
AMCG00000493 NA coding downstream 408150 16276998 ~ 16278955 (-)
AMCG00000494 NA coding downstream 420792 16253137 ~ 16266313 (-)
AMCG00000472 NA coding downstream 1068076 15616963 ~ 15619029 (-)
AMCG00000481 NA coding downstream 1267535 15415530 ~ 15419570 (-)
AMCG00000496 setd3,LOC100195551 coding upstream 32528 16722174 ~ 16736751 (-)
AMCG00000497 ccdc85c,LOC107740595,LOC107668618 coding upstream 59743 16749389 ~ 16758438 (-)
AMCG00000519 LOC105902331,LOC107678669,LOC107747948,LOC107555299,LOC107572128 coding upstream 103929 16793575 ~ 16794321 (-)
AMCG00000515 NA coding upstream 115073 16804719 ~ 16808751 (-)
AMCG00000517 NA coding upstream 139149 16828795 ~ 16833690 (-)
G150661 NA non-coding downstream 453916 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 815637 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 928945 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 1067317 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 1106184 15578889 ~ 15580921 (-)
G150731 NA non-coding upstream 133383 16823029 ~ 16840596 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 1074944 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 1076301 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 1089582 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1409932 18099578 ~ 18100896 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 1159715 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 1208056 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 1395850 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1464362 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1549182 15124025 ~ 15137923 (-)
G150729 NA other upstream 115549 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 144113 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 864072 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 995919 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1186723 17876369 ~ 17878350 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location