AMCG00000493


Basic Information

Item Value
gene id AMCG00000493
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16276998 ~ 16278955 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000493
ATGACTGGCTGTGAGGAAGACAACATTGCAGAACTGACTTCCTCTCCGCAATttacaaagaaatgcaaaggTGAAAAACATGTGTCTTTCCCTCCGGATGAAGAAATAGTATCAGGCTTCGCTGAACACAAGGACGTGTTGAGGGACGACAGCATCACCTTGGAAGAGATAATAGCCACCTATAAGCAGAGCTGTTTGAAGCACCAAGTGGAACCCAATTCAAAGATACTGGAACAGCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000493 True 243 mRNA 0.45 2 16276998 16278955

Neighbor

gene id symbol gene type direction distance location
AMCG00000494 NA coding downstream 10685 16253137 ~ 16266313 (-)
AMCG00000472 NA coding downstream 657969 15616963 ~ 15619029 (-)
AMCG00000481 NA coding downstream 857428 15415530 ~ 15419570 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 865724 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 886048 15383657 ~ 15390950 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 371116 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 408150 16687105 ~ 16689646 (-)
AMCG00000496 setd3,LOC100195551 coding upstream 443219 16722174 ~ 16736751 (-)
AMCG00000497 ccdc85c,LOC107740595,LOC107668618 coding upstream 470434 16749389 ~ 16758438 (-)
AMCG00000519 LOC105902331,LOC107678669,LOC107747948,LOC107555299,LOC107572128 coding upstream 514620 16793575 ~ 16794321 (-)
G150661 NA non-coding downstream 43809 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 405530 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 518838 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 657210 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 696077 15578889 ~ 15580921 (-)
G150731 NA non-coding upstream 544074 16823029 ~ 16840596 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 1485635 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 1486992 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 1500273 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1820623 18099578 ~ 18100896 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 749608 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 797949 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 985743 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1054255 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1139075 15124025 ~ 15137923 (-)
G150729 NA other upstream 526240 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 554804 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 1274763 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 1406610 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1597414 17876369 ~ 17878350 (-)

Expression


Co-expression Network