AMCG00000494


Basic Information

Item Value
gene id AMCG00000494
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16253137 ~ 16266313 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000494
GAAATATTAGATTACCAGTCGTGTGAGTCTCTTGAAGAAATACTGAAGGTACTCCAGTTTGAATTCATCAATTTGCAGGAAACCAAATTGGAGCAGAATGGAGCATCTGCTGTGTTGGATATGATCTTATACTATGAGTCGACCACACATCTGAACATATCTTCTAACAAAAGTATCGGAGTCCCAGGTTGGCGAGCTCTCTCTCACTTGATACAAAAGCTAAATAAAGTGGCATCTAGGTCTAAACTTGGGTATAAGCACACTGATGAGGCAGCGCCTGCTGATGTGAGCGTTGTGTTTCAGAGCAGGTGCCTGTGGAGACTGGATGCCTGTAACATGCCTCTCCTGGAGTATCCGGCGCAGACCTTGTCAAAAGCCCTGCTTTCCGGTCGGCTGGCTGTACTGCACCTTGAAAACACCTGCTTAAGTGGCAGGCCGCTCTTTACTCTGGttGGTGCTCTCAAGGTAAACTCAGCCTTACAAGAGCTCTACCTCTCGAACAATGAACTCAACAGCTACCAGGACTCGATGCAGCTGAGTGAACTTTTCAAATATAACCACTGCCTTACATTGCTGGACTTAAGCAACAACCTTATTTCTGATGCAGGTCTGGAAGAAATATGTGACGGGTTAAGACTGCAGCAAACTCGGATTCGAAATCTTATACTGTGGAACAACCAAATAACATACCGAAGTATGATCCATCTGGCTAACATTTTGAATGAAGGCATCCAACGCCTAAAAGAAGCTCTAATAGCAAACCGGTCTCTTCTACATATCGGACTGGCCTATACTAGAATAACTTGTGAAGGTGCTGTAGCCCTGGCAGAGTTCATTGTCGAGAGTCATCAAATTCAACGGCTTGATGTCCGAAAAAACTTAATCAAAACAGGAGGTCTCATGGCCTTCTCCCTGGCATTGAGAATAAACCGATCACTAATCAGGGTGGACTTAgacaaaaaagcaaagaaagaggAGGAGCTGGCGTCTGCTCTGGTTAGAGATGAAGACATCACCATGACAGGACCCCAGGAAAGGATCAGCTGGTATCCTGGGTACCAC

Function

GO: NA

KEGG:

id description
K17576 PPP1R37, LRRC68; protein phosphatase 1 regulatory subunit 37

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000494 True 1062 mRNA 0.45 8 16253137 16266313

Neighbor

gene id symbol gene type direction distance location
AMCG00000472 NA coding downstream 634108 15616963 ~ 15619029 (-)
AMCG00000481 NA coding downstream 833567 15415530 ~ 15419570 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 841863 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 862187 15383657 ~ 15390950 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding downstream 932922 15311001 ~ 15320215 (-)
AMCG00000493 NA coding upstream 10685 16276998 ~ 16278955 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 383758 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 420792 16687105 ~ 16689646 (-)
AMCG00000496 setd3,LOC100195551 coding upstream 455861 16722174 ~ 16736751 (-)
AMCG00000497 ccdc85c,LOC107740595,LOC107668618 coding upstream 483076 16749389 ~ 16758438 (-)
G150661 NA non-coding downstream 19948 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 381669 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 494977 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 633349 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 672216 15578889 ~ 15580921 (-)
G150731 NA non-coding upstream 556716 16823029 ~ 16840596 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 1498277 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 1499634 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 1512915 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1833265 18099578 ~ 18100896 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 725747 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 774088 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 961882 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1030394 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1115214 15124025 ~ 15137923 (-)
G150729 NA other upstream 538882 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 567446 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 1287405 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 1419252 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1610056 17876369 ~ 17878350 (-)

Expression


Co-expression Network