AMCG00000517


Basic Information

Item Value
gene id AMCG00000517
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16828795 ~ 16833690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000517
ATGAGAAATAAAGAGGACGTGCCAAAGGATATACTGACCAACATTCTGCAATGTGCTGGTAAATATGTCGAGCAGCAGCAGGGTGATTTCTCTGAGGATAAAATAATGGAACTGGCAAGACACCCAGAGATAACGGAAAAactCATTTTAGAGGTTGATGAAGCAATTGGTTCAAAGCGTGAGATCGATTATAATGATCTTGCAAAGCTGCCATACTTGTCCCAGGTTTTGAAAGAGTCTCTGAGAATGTATCCCCCCGCCCCTGGCACGTCTCGCTTGATCACTGAAGACACGGTCATTGAAGGCATTCACATTCCTGGGGGGGTCGCTGCTCTTcTGCTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000517 True 345 mRNA 0.45 5 16828795 16833690

Neighbor

gene id symbol gene type direction distance location
AMCG00000515 NA coding downstream 20044 16804719 ~ 16808751 (-)
AMCG00000519 LOC105902331,LOC107678669,LOC107747948,LOC107555299,LOC107572128 coding downstream 34474 16793575 ~ 16794321 (-)
AMCG00000497 ccdc85c,LOC107740595,LOC107668618 coding downstream 70357 16749389 ~ 16758438 (-)
AMCG00000496 setd3,LOC100195551 coding downstream 92044 16722174 ~ 16736751 (-)
AMCG00000488 NA coding downstream 139149 16687105 ~ 16689646 (-)
AMCG00000516 LOC108413947 coding upstream 32119 16865809 ~ 16883174 (-)
AMCG00000500 sptlc2,LOC107751731 coding upstream 51354 16885044 ~ 16903230 (-)
AMCG00000499 NA coding upstream 93918 16927608 ~ 16935797 (-)
AMCG00000501 snw1,LOC107681047 coding upstream 104087 16937777 ~ 16942568 (-)
AMCG00000534 NA coding upstream 623299 17456989 ~ 17459798 (-)
G150661 NA non-coding downstream 595606 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 957327 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 1070635 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 1209007 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 1247874 15578889 ~ 15580921 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 930900 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 932257 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 945538 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1265888 18099578 ~ 18100896 (-)
G151071 NA non-coding upstream 1540108 18373798 ~ 18374097 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 1301405 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 1349746 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 1537540 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1606052 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1690872 15124025 ~ 15137923 (-)
AMCG00000518 NA other upstream 69 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 720028 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 851875 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1042679 17876369 ~ 17878350 (-)
AMCG00000539 NA other upstream 1172984 18006674 ~ 18009850 (-)

Expression


Co-expression Network