AMCG00000518


Basic Information

Item Value
gene id AMCG00000518
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16833759 ~ 16836603 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000518
gTACCTGAAAGGGTAGCATTTGGAATGGATTTGAATTTGTTGGATGATAACACATCTGCTTTTCCCAAAGCCATCGCATTGTGTTTGAAAGGGATGATCTACTTTATTAGAAAGCCATTCATGCACACACCAGCAGACACCAAACAGGTGCATTTTTTCCCAACAATTTTTTTCAGCTTCTTCCTTGGAATTGGAAGTTTGTGA
>TU189693
GTTTTGTGTCTTTGTCAGGGCTNNNNNNNNNNGACCTGTCTATCGTGTGAATTTTCTTCACTCTGTGGTTTTGAATATCACCTGTCCAGAAGCGGTCAAGGAATATCTGATGTCTCCGAAGTATCCCAAAGATCAATTTACATATAAACGGCTGTTTCATTTGTTCGGGAAAAGATTTTTTGGAAATGGACTCATAACTGACACTGACCACGATCATTGGTACAAACAGCGCAGAATTATGGACCCAGNNNNNNNNNNNNNgTACCTGAAAGGGTTAATGGGCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000518 False 204 mRNA 0.39 3 16833759 16834411
TU189693 True 287 lncRNA 0.38 4 16834386 16836603

Neighbor

gene id symbol gene type direction distance location
AMCG00000517 NA coding downstream 69 16828795 ~ 16833690 (-)
AMCG00000515 NA coding downstream 25008 16804719 ~ 16808751 (-)
AMCG00000519 LOC105902331,LOC107678669,LOC107747948,LOC107555299,LOC107572128 coding downstream 39438 16793575 ~ 16794321 (-)
AMCG00000497 ccdc85c,LOC107740595,LOC107668618 coding downstream 75321 16749389 ~ 16758438 (-)
AMCG00000496 setd3,LOC100195551 coding downstream 97008 16722174 ~ 16736751 (-)
AMCG00000516 LOC108413947 coding upstream 29206 16865809 ~ 16883174 (-)
AMCG00000500 sptlc2,LOC107751731 coding upstream 48441 16885044 ~ 16903230 (-)
AMCG00000499 NA coding upstream 91005 16927608 ~ 16935797 (-)
AMCG00000501 snw1,LOC107681047 coding upstream 101174 16937777 ~ 16942568 (-)
AMCG00000534 NA coding upstream 620386 17456989 ~ 17459798 (-)
G150661 NA non-coding downstream 600570 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 962291 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 1075599 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 1213971 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 1252838 15578889 ~ 15580921 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 927987 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 929344 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 942625 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1262975 18099578 ~ 18100896 (-)
G151071 NA non-coding upstream 1537195 18373798 ~ 18374097 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 1306369 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 1354710 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 1542504 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1611016 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1695836 15124025 ~ 15137923 (-)
AMCG00000533 NA other upstream 717115 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 848962 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1039766 17876369 ~ 17878350 (-)
AMCG00000539 NA other upstream 1170071 18006674 ~ 18009850 (-)
AMCG00000559 NA other upstream 1468482 18305085 ~ 18307793 (-)

Expression


Co-expression Network