AMCG00000532


Basic Information

Item Value
gene id AMCG00000532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 17481663 ~ 17508555 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000532
gatacCTCTTTAGAAAAGCTATCCCAGCCATGGCCGAAACATCCAGTGATTCAGACACGTACTCGAGGAATCGTGTGAACCGCCCGGGCCGCGTCAGAGCAACACATCTGACCAGCCCGAGAAGAAGCAGGGTCAATGGATCTGTGAACATTTCAGAGAAGATCGATACTTTGGCCAACACTTTACAGGACACCAGTCGAAATCTGCATACTGTTGATCGGATGTTGGGCCAGTACAGAGAGCACACAGAGGACCAGGCCGAAGCAATGGGCATGctCAGAGAGAACCTAGAGCAATCTATTCATCAGTTAAGGAGTCAGAGACTTCGAAGGAACTCTGGAGCCAGGAGTGCATCGCTTTCCACTTTACACACGAGTGACTTAGATGGAGGATCGGCCTCTGAAAATCATCATTACCGCCCCACCTCACCACTACGGGATTATGGGCCTTTCGAAGGCACTggcagaaggaggtcaaggtcAGCCACCGTACGGTTTATGGATGAAAGTGAACCAGTTGAGCACATCCACGAGATGCACCAGTCCCTCCGAGACCTCCGCAGTGAGCAGCTACGCTTAGGAGATGATGTGGAGAGAGAAATTGTCAGGCGAAACAGGGTTGATATTGAAACCAAAAAGACTTTGGAAAATTTATCAGACAGTCTAAGAACATCACAGAGAGAAGAAACGGCCTCCGAGCGAGTGGAGAGACGTCTGCAGGAGATAGAAAAGGAAATGCGGTCGGAGCGACGGCAAGTGGAGAAGCGTCCGGAGCAGCGAGGACACATGTCCCTGCAGTTGCAGGAGGCTTTGAAGAAAAGAGAGGCGAAAGCCGGTGAAAGCGAGGATGTCATGAAGAGCAAGCTGCTGAGATCTGAACTGGAGAAGAGCAAGATCAATGACCTTCGAGCGCAGCTGCTGAAGACCGAGCACGACTCCCTGGACATGCAGCGGCAGATCTCAGAGATTTCTCTAACGCGGCGCAGTCGTCAGGACGAAGAGGAACAGGAGCGGAGTTTGAGGACAGCAAGTCAACGGTCAGAGCGCGAgaagcaggagctggagaagcAAGTCCAGGAGCTGAGGCTGCAGCTCGGGCGCAGCGCGGTGATGTCTGAACTGGACGAGCTGAAGAGGGCCATCGAGcgcaaagagagggagaaaacgCAGCTCAACGCGCACATCGAGGCGCTGTCCTCAGACCTGGACAAGCGGGAGCAGCAGCAGTTGAGGATGCTGGAGCAGCTGAAGGAGATCCAGAGCCACTCCGAGCAGAGCGAGGTGGACAGCGGGCGCATGGCGCTGCGTGTGGAGGAGCTGGCCGGCCAGCTAAAGGAGTCCAGGAGGGAGGCGGATAAATACCTGGGCATGGTGAAGGAGGCCGAGGCGCTGAGGGAAGAGAGcgagaggaggaaggaggacCTGAGGGCCAAAGCCCAGGAGTCCATCAAGCAGTGGAGGCTGAAGTGTAAGAAACTGGAGCGGGACCTGGAGAAGCAGACCGGGGTGGCGGAGCTCATGACGGAGAAGAGCAGCCAGGTgctgaaagaaaaggaaagcctCCAAGGGCAATTCCAGATAGTCAGCCATCAGTTGGATAACCTCCGCAAAGAGCTGAGCGATGTCCTGTCAAAGCTGGCACACAAGGAGGAGGAGGTCCACTGCAAAGACGTGGAGCTCAACGAGACCAGGGCGCGGCAAATGAGCCTGGAGCACGAGATCCGGGAGGCAAGGGACGTGGCCTGTAAGCTGGAGAGTGAAGTGGAGAAGCAGAACCTGTTGCAGGTGCAGCTGAAGGACGAGAACCAACGTCTGGAGAGCGAAGTTGACGCCCTGAGCAGAAAGAGGGAAAAGGACAAGGAGACGGTCCTGGAAATGCAAGGGGCCATCAAAGACCTGAGCGCCATCCGAGCCAATTTGACCGACAGGCTGGCTGAGGAGGAACGGGCCAGGAAGGAGCTGAAGAGACATGTGAGCGAGCTGCAGCACCAGCAGGACTCTGCTCAACAGGAGCTTGCCTCTGTGGGCCAACAGCTGAAGCTTGAGAGGGACCTGCACCAGAGGGAGCTGGTGGGACTGAGAGCGGAGCTGCAAAACGCAAAAGTGAAGCACGAAAAAAACTTCCAGGAGGCACTGCAACTGTTCAGACAAGAGAGAGACGAGCTGGAGATCCACCTGAGAGATTTGAAGGCAGAAGCAACAGTGGACAAAAACTTGGTTAAAGCTCACCGCCGGCAGCTAGAGAAGATGAAGATTGAATGTGACAAACTGACAGAGGAACTAacccagagagaggaggaaaacacGAAGCTGAGGAGGAAGTACCAGCTGCTGAAGCAGGAGCTGGAAGAGAAGGGGAAATTGATCACCAGCGGAGACGACCGCGTTAGAAGGATGGATGAAGCGATTCTGGAGCTCAGAGAACAAATTGACTGTTTGGAGACGGAACAGGAATCCATACTTCGCACCATAGGAACCGAAATTGACTCTGCGTGTGAAGTTTTCGCTCGGGACTCGGATGAGAAATTCAAAGTAATATCCCTAACACCTGGCCTCCAGAAGGACCCACATCGCTGGCTGGCAGAGATGAAGACAAAGCTGCAGTGGCTGTGTGAagaggtgagggagagagagggtcaaCAAAAGAAGCTGAGACGTCATCTGCAGCAAGGCCGAGAGCAGCTCAAGGGCCTCAAACAGAATAAGGAATCTGAGCAGCAACTTCTGATTGAGCAGATCTCAAAGCAGGAGCAGCTGCTCGAGGAGATCCACAAAGAAAAGAGA

Function

GO: NA

KEGG:

id description
K16460 CEP128; centrosomal protein CEP128

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000532 True 2783 mRNA 0.54 16 17481663 17508555

Neighbor

gene id symbol gene type direction distance location
AMCG00000531 NA coding downstream 15961 17462406 ~ 17465702 (-)
AMCG00000534 NA coding downstream 21865 17456989 ~ 17459798 (-)
AMCG00000501 snw1,LOC107681047 coding downstream 539095 16937777 ~ 16942568 (-)
AMCG00000499 NA coding downstream 545866 16927608 ~ 16935797 (-)
AMCG00000500 sptlc2,LOC107751731 coding downstream 578433 16885044 ~ 16903230 (-)
AMCG00000535 gtf2a1,LOC107581504,LOC106571676,LOC107712853,LOC107721813 coding upstream 36808 17545363 ~ 17552867 (-)
AMCG00000511 NA coding upstream 88905 17597460 ~ 17600490 (-)
AMCG00000510 foxn3,LOC107680774,LOC107751738,LOC107755777,LOC107583483 coding upstream 103479 17612034 ~ 17640564 (-)
AMCG00000528 NA coding upstream 259528 17768083 ~ 17772745 (-)
AMCG00000523 NA coding upstream 265245 17773800 ~ 17789068 (-)
G150731 NA non-coding downstream 641067 16823029 ~ 16840596 (-)
G150661 NA non-coding downstream 1248474 16232958 ~ 16233189 (-)
G150634 NA non-coding downstream 1610195 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 1723503 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 1861875 15619221 ~ 15619788 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 256035 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 257392 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 270673 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 591023 18099578 ~ 18100896 (-)
G151071 NA non-coding upstream 865243 18373798 ~ 18374097 (-)
AMCG00000518 NA other downstream 645060 16833759 ~ 16836603 (-)
G150729 NA other downstream 647337 16805195 ~ 16834326 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 1954273 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 2002614 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 2190408 15289303 ~ 15291255 (-)
AMCG00000533 NA other upstream 45163 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 177010 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 367814 17876369 ~ 17878350 (-)
AMCG00000539 NA other upstream 498119 18006674 ~ 18009850 (-)
AMCG00000559 NA other upstream 796530 18305085 ~ 18307793 (-)

Expression


Co-expression Network