AMCG00000625 (gpr135,LOC107564991)


Basic Information

Item Value
gene id AMCG00000625
gene name gpr135,LOC107564991
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 19970478 ~ 19971836 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000625
ATGAGCCTTGCTTTgctcggcggcggcggcggcggcaacACCTCGGGGAGAGAGCTGCTGCTGGACATCCTCACCCCCACCCCGGCGCCGGCCAGCCTCAGCACCCACCTGGGCACCGGCAACCAGAGCGGCCGCGGAGCCGACCAGGACCGGCACTCTGCCCCCGGAAAGGACGCCGAGCCCAGCTCCCTTCTGCACGGCATCGCAGTGGCCGCGCAAgccctcatcctcctcctcatcttcctcctctccaGCCTGGGAAACGCGGCGGTGGTCATCGTCATCATCAAACACCGGCAGCTGCGGACGGTCACTAACGCCTTCATCATGTCCCTGTCGCTGTCCGACTTCCTCACGGCCGTGCTGTGTCTGCCCTTCTCCTTCATCATGCTCTTCAGCCGGGACGGCAGCTGGATCTTCGGGGACTGCTTCTGCGTGGCCAATGGCTTCTTCAACACCTGCTTCGGCATCATCTCCACCCTGACCATGACTCTGATCTCTTTCGACCGCTACTACGCCATCGTCAGGCAGCCCCAGGAGAAGATCGGGAGGAGGAAGGCCACGCAGCTGCTGGTGGCCGTCTGGGTGAGCGCCGTGCTCTTCTCCTTCCCCTGGGACGTGCTGGTGCCCCCCTCCGAAACCCTGGTGGTCCACAAGAGGGGCTTCTACCACTGCATGTACGTCTTTCACTCCAGCACCTCCAGGATGGGCACTGCCTACAGCATCTCCCTGATCGTGGTCTGCTACCTCCTGCCCTTCGCCCTCATGTGCTTCTGCCACTACAACATCTGCAAGACGGTGCGGCTGTCCGAGATCCGGGTGCGGCCGGTGACCACCTATGCGCACCTGCTGCGATTCTACAGCGAGATGAGGACGGCCACCACCGTGCTGATCATGATCGTCTTCATCATTTTCTGCTGGGGGCCGTACTGTGTCATGGGCATCATCACCGCCGTGGGGGACTACCCTTTCAGCCCCGTCATGGACACCGTGGCTATCTGGATGGCGTGGGCCAACGGGGCCATCAACCCGCTCATCTACGCCCTGAGGAACCCCAACATCTCCATGCTCCTGGGGCGCAACAGGGAGGAAGGGTACAGGACTAGAAACATCGCCGCCTACCTGTCCACGCAGAGCCAGAGCCGGGAGGCCAGGACCCGGGCCGACCGGATTAGAGACCGGTATGTGAACAGACACGGGGCGGGCAGTCGCTTGTCCTCCTCCAGTCCGGCCAATGGTGGGGACGTGGCCATGTGGGCCTGCAAGAACCCCGCGGTGCTGTTCTGCCGGGACGGGCAGCCGGACACGCTGTCGGAACCGGCTGTGCCCAAATCCGAGACTGCAGATACCAGCCTTTAA

Function

symbol description
gpr135 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: probable G-protein coupled receptor 135

GO: NA

KEGG:

id description
K08427 GPR135; G protein-coupled receptor 135

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000625 True 1359 mRNA 0.64 1 19970478 19971836

Neighbor

gene id symbol gene type direction distance location
AMCG00000615 NA coding downstream 83426 19882464 ~ 19887052 (-)
AMCG00000619 NA coding downstream 376929 19552361 ~ 19593549 (-)
AMCG00000611 sstr1,sstr1a,LOC107729242,LOC107586672,LOC107693103,LOC107734409 coding downstream 483436 19485939 ~ 19487042 (-)
AMCG00000607 NA coding downstream 588347 19378217 ~ 19382131 (-)
AMCG00000608 LOC107589661,LOC107679124 coding downstream 592857 19361226 ~ 19377621 (-)
AMCG00000624 l3hypdh,LOC107684001 coding upstream 535 19972371 ~ 19974873 (-)
AMCG00000623 jkamp coding upstream 3280 19975116 ~ 19988480 (-)
AMCG00000633 lrfn5,LOC106601106,LOC106611182,LOC108443922 coding upstream 286341 20258177 ~ 20269173 (-)
AMCG00000629 NA coding upstream 559357 20531193 ~ 20539645 (-)
AMCG00000628 pnn,LOC107586617 coding upstream 568172 20540008 ~ 20544727 (-)
G151447 NA non-coding downstream 347091 19621137 ~ 19623387 (-)
G151446 psma3,LOC107729246,LOC107725600 non-coding downstream 351410 19612250 ~ 19619068 (-)
G151416 NA non-coding downstream 487171 19481328 ~ 19483307 (-)
G151393 NA non-coding downstream 570385 19398722 ~ 19400093 (-)
G151291 LOC108257835 non-coding downstream 977634 18989075 ~ 18992844 (-)
G151678 NA non-coding upstream 839704 20811540 ~ 20812254 (-)
G151725 NA non-coding upstream 942605 20914441 ~ 20914680 (-)
G151726 NA non-coding upstream 943405 20915241 ~ 20916217 (-)
G151727 NA non-coding upstream 944394 20916230 ~ 20917085 (-)
G151739 NA non-coding upstream 1008237 20980073 ~ 20980345 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other downstream 323871 19643864 ~ 19646607 (-)
AMCG00000613 NA other downstream 439424 19503699 ~ 19531054 (-)
AMCG00000599 NA other downstream 633736 19333717 ~ 19336742 (-)
G151090 NA other downstream 1554637 18415522 ~ 18415841 (-)
G151089 NA other downstream 1555920 18414055 ~ 18414558 (-)
G151593 NA other upstream 660253 20632089 ~ 20634946 (-)
AMCG00000635 NA other upstream 772543 20744379 ~ 20752657 (-)
AMCG00000653 NA other upstream 954855 20926691 ~ 20935429 (-)
G151771 NA other upstream 1466431 21438267 ~ 21457795 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000311_01576050_01577393 GPR135 coding CI01000311 null 1574694 ~ 1578780 (+)