AMCG00000672


Basic Information

Item Value
gene id AMCG00000672
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 21631753 ~ 21635860 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000672
CGCGTCCTAAACCCGGACGGTGTCGACCCTGCAACATGGCGGCGGCAGGGGGTCCCGAGCGCGCGCGGGCGGTGCTGCAGCAGTGCCTGCGCGCGAGCCTGCAGGTGAAGCCCCCCGGGCCGGGCGCGCAGGCGGAGTGGGTGCAGATTGAGAGGGGGATGGTGATTTACATCTGCTTTTTCAAAGGGGCCACAGATGAGATAATTCCCAAAATAGTGAACTCTCTCCTGAACCTGAAACTGTGTGAGACGCCGGCCGGGCAGTTCGTGTCCGTGCTGGAGCTCCCAGGGGACGTGCTGGTCGTCCCTCAGGCCACCCTGGGCGGAAAGGCCAAGGGGAAGAGAATGCAGTACCACGCCAACATCGACAAGGAGGACGGGATGAAGCTGTACGGCCAGTTCGTGTCCGAATGCCAGAGGGAGCTGGCCTCGTGCGGCCACTGCGGCGAGGCGGGAGTGGTGCTGCGACACGGGACCTATGGCAATAGACAGGTGCTGAAACTGGACACCAATGGGCCCTATACACACCTCATGGACTTCTGACCAAAGCCACAGTCATTGCTCGTCTACTGCTTACTTCTACTgcgtatatgtatttgtttctatggctgagggagggagggaggagtgTTTCGTCACAGTGTAACAAAGATTCTTTCTGTTAATTCTTCCCATTTTGTTCCTCAATTGCAACAGAAATCATAAAATGGGAAAAGGAGAACTAGTACTGAAGTTCCCTTATTTGCACAAAGCTCACCGTGATATACCTCTGAATTCCCAGCCATAAACGACAAACCATATGAATCTGTTTAATATTCATTGTCGTGTTATAATACATGTCATTCCTGAATGCTTAACAGTTCATAATATATTGAAACTAATTataaaatagattattttggattaaataaaattggGTTCTGCTTACCTAATGCATTTCAGAGTATCGCTCATCCTAGCTGAGAAGTTGTGCGCCGTTATTGATTTAACCTGAAAAGATTTATTGAACCCAACTGTATTTTCATCCAAATTTCAACATAAATCTGTATCTGAATAAAACTCTGATCGATTTTGTGAAAATGCTTTTGCGTTGACTTCGCCGTGATTCTGAAGGGCAGGAAATTGATACGCAATCCATCGTCACCAGAATGCGGGTGCATTTATAATCCAGCCTCTAACCTTCTAGATGACATTGGCGcgctgtatttgtattaaatgcacAATCTCACGA

Function

GO:

id name namespace
GO:0019478 D-amino acid catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016788 hydrolase activity, acting on ester bonds molecular_function

KEGG:

id description
K07560 dtd, DTD; D-aminoacyl-tRNA deacylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000672 True 1230 mRNA 0.48 3 21631753 21635860

Neighbor

gene id symbol gene type direction distance location
AMCG00000674 NA coding downstream 8126 21595838 ~ 21623627 (-)
AMCG00000673 hectd1,LOC107697712,LOC107719534,LOC107733112 coding downstream 37188 21566188 ~ 21594565 (-)
AMCG00000676 NA coding downstream 72369 21547937 ~ 21559384 (-)
AMCG00000675 NA coding downstream 84115 21529168 ~ 21547638 (-)
AMCG00000656 NA coding downstream 248099 21380694 ~ 21383654 (-)
AMCG00000667 NA coding upstream 96063 21731923 ~ 21733685 (-)
G151739 NA non-coding downstream 651408 20980073 ~ 20980345 (-)
G151727 NA non-coding downstream 714668 20916230 ~ 20917085 (-)
G151726 NA non-coding downstream 715536 20915241 ~ 20916217 (-)
G151725 NA non-coding downstream 717073 20914441 ~ 20914680 (-)
G151678 NA non-coding downstream 819499 20811540 ~ 20812254 (-)
G151771 NA other downstream 173958 21438267 ~ 21457795 (-)
AMCG00000653 NA other downstream 696324 20926691 ~ 20935429 (-)
AMCG00000635 NA other downstream 879096 20744379 ~ 20752657 (-)
G151593 NA other downstream 996807 20632089 ~ 20634946 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other downstream 1985146 19643864 ~ 19646607 (-)

Expression


Co-expression Network