G147265


Basic Information

Item Value
gene id G147265
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 278713 ~ 284041 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185312
gggacttagataatattcagttgtgggctgacacctggcagatgaaattcaatgtggacaagtgcaaggtattacatgcaggtaacaaaaatgtccactataattacactatgggaggaatagaactagatgaagtaacacatgagaaagacctaggagtctatgtggaatcttcactttctccatccaaacaatgtggggaagcaataaaaaaggcaaacagaatgttagggtatattgtcaaaagtgtagaattgagaacaagggcagtaatgttcagactgtacaatgcactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185312 True 297 lncRNA 0.39 2 278713 284041

Neighbor

gene id symbol gene type direction distance location
AMCG00000028 NA coding upstream 122906 146945 ~ 155807 (+)
AMCG00000030 NA coding upstream 131779 141021 ~ 146934 (+)
AMCG00000031 NA coding upstream 163935 114557 ~ 114778 (+)
AMCG00000027 NA coding upstream 172031 106015 ~ 106682 (+)
AMCG00000029 NA coding upstream 250049 27600 ~ 28664 (+)
AMCG00000034 NA coding downstream 33523 317564 ~ 336417 (+)
AMCG00000038 LOC102299462,LOC102207316,LOC108269999,LOC100697238 coding downstream 108137 392178 ~ 418905 (+)
AMCG00000039 NA coding downstream 144513 428554 ~ 428826 (+)
AMCG00000040 NA coding downstream 217454 501495 ~ 569704 (+)
AMCG00000041 NA coding downstream 445861 729902 ~ 743938 (+)
G147286 NA non-coding downstream 53425 337466 ~ 339514 (+)
G147288 NA non-coding downstream 72731 356772 ~ 356988 (+)
G147292 NA non-coding downstream 102249 386290 ~ 386953 (+)
G147313 NA non-coding downstream 186654 470695 ~ 473507 (+)
G147314 NA non-coding downstream 198073 482114 ~ 485461 (+)
AMCG00000032 NA other upstream 24272 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 174351 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 240938 28694 ~ 37775 (+)
G147311 NA other downstream 165611 449652 ~ 498511 (+)
G147416 NA other downstream 779044 1063085 ~ 1116950 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 1751982 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 2119689 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 3406731 3690772 ~ 3699093 (+)

Expression


Co-expression Network