G147311


Basic Information

Item Value
gene id G147311
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 449652 ~ 498511 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185369
CCGCATGACCTGTCCCAGCGAGAGAGACAAAGTGGTAACTATCGCTTTcacaaaaataaggaaattcCCAGCTGAAGGAGTTAAAGgacATGAAGATCTTGCTAGCACTGGTCATACTGCATCTGTCCTCTGCACCAGGGCTCTGTTGGCAGAGGCGCAGGCGACAGAGTGATTACTGGGGAGAGTGGGGGGACTGGGGCGAGTGCAGCCGGACCTGCGGGAGTGGCATCACAGTGCGCTACAGACACTGCATCTCACAGAGGGCAGACAGAGGGACCAACTGTGTGGGACCATCCAAGGCCTTCCGATCCTGTAACATCCAGGTGAAGAACAAAGCCCAGAAGAAGCCTGTGTGACACTTATtgagtgtatatttaattttctgttctgcTTGCGTCTGCCTGGCTATGCACATGTCCCTCATTCTAGCTTTTTTAttgactgttttattttccttgacaCACATGCagctttgcatttctttttttgtctcaCATCCTTACTCTAATAAATTACCTTTATTGTAAAGTAGCATCTGCAGCTTTTAAGATGCCTTCATTACAGAAAAATGCAGTCCGCTTCCCTCTGGCAGAAACCAGCTACTGACAGACTGGTgccgtctctctctgtcaaacTGCTTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185369 True 644 TUCP 0.48 4 449652 498511

Neighbor

gene id symbol gene type direction distance location
AMCG00000039 NA coding upstream 20826 428554 ~ 428826 (+)
AMCG00000038 LOC102299462,LOC102207316,LOC108269999,LOC100697238 coding upstream 30747 392178 ~ 418905 (+)
AMCG00000034 NA coding upstream 113235 317564 ~ 336417 (+)
AMCG00000035 NA coding upstream 133172 256457 ~ 316480 (+)
AMCG00000028 NA coding upstream 293845 146945 ~ 155807 (+)
AMCG00000040 NA coding downstream 2984 501495 ~ 569704 (+)
AMCG00000041 NA coding downstream 231391 729902 ~ 743938 (+)
AMCG00000044 NA coding downstream 245832 744343 ~ 787026 (+)
AMCG00000047 NA coding downstream 288573 787084 ~ 787849 (+)
AMCG00000048 NA coding downstream 317430 815941 ~ 816517 (+)
G147292 NA non-coding upstream 62699 386290 ~ 386953 (+)
G147288 NA non-coding upstream 92664 356772 ~ 356988 (+)
G147286 NA non-coding upstream 110138 337466 ~ 339514 (+)
G147265 NA non-coding upstream 165611 278713 ~ 284041 (+)
G147380 NA non-coding downstream 329944 828455 ~ 1174302 (+)
G147393 NA non-coding downstream 406459 904970 ~ 1069770 (+)
G147405 NA non-coding downstream 442347 940858 ~ 941911 (+)
G147466 NA non-coding downstream 690297 1188808 ~ 1189042 (+)
G147551 NA non-coding downstream 991069 1489580 ~ 1492313 (+)
AMCG00000032 NA other upstream 195211 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 345290 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 411877 28694 ~ 37775 (+)
G147416 NA other downstream 564574 1063085 ~ 1116950 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 1537512 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 1905219 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 3192261 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 3222474 3720985 ~ 3724316 (+)

Expression


Co-expression Network