G147368


Basic Information

Item Value
gene id G147368
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 739606 ~ 740609 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185440
tgtgtagcgtaaggtacacttataaatttcaattaaagaagtgaatttatagtatcaccttataacgaatcctggaatcttgtagaactcaatttctgtaataattggatgcagacaccaattacaaagatataaattgtcaaatttattcaaaaacaaagactaaatgtagcactacactaattatacaaaagggaaaaactaattaaaattcaactctagatcaacaaatcaaagaccatgggatcgcatatgataacacacaaatcgttaaacaaaaaaggttataaacacattgactacaataccggttagtaagacgaaggtgagtctctcattagtattgttagtcggacattaaataactatgcagtatttagtatttagtagttagtatttatgtcaggtaacttctcgttatatatatatcagtctcatttacatttaggtgtggagaaagatcctatcattacttgttaccacaatttcccttaactgattattgtTAAATGATTAAGGaaaggcagggccacctataatctggtgtctattaacttgtgtcaatttcagactaaacagttaaacaggaatgagaagatatttctcagcgttgacagattttatttctaaaattatcaacaaaacagtttaatgcaacacacatttatatttaagaaaactaaatgatattacacattctagagttatgaatcacagattaacatttctaattgatttctcaaaagtcatgaatcacaaactccaaactgttaaacttatctgaacttctcagcctctctggcttcgggctcagataacagcacacggcacgaggtccgtgtggtttggaacaaaggcagtccggttcggctttgtccaagaagttggggtttcgcgaatgtagagtcttttccaaacagattttccactggtttgaaggctccaaggttgtgcacaaaatcttctttgtaagcggggttccaccatagttacttgaagacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185440 True 1004 lncRNA 0.34 1 739606 740609

Neighbor

gene id symbol gene type direction distance location
AMCG00000042 NA coding downstream 30155 703657 ~ 709451 (-)
AMCG00000043 NA coding downstream 145993 573375 ~ 593613 (-)
AMCG00000036 NA coding downstream 374938 343411 ~ 364668 (-)
AMCG00000033 NA coding downstream 482636 255301 ~ 256970 (-)
AMCG00000045 NA coding upstream 99168 839777 ~ 840646 (-)
AMCG00000046 NA coding upstream 100097 840706 ~ 859715 (-)
AMCG00000065 LOC106591853 coding upstream 563330 1303939 ~ 1342353 (-)
AMCG00000062 NA coding upstream 652200 1392809 ~ 1441915 (-)
AMCG00000058 churc1 coding upstream 743911 1484520 ~ 1488089 (-)
G147358 NA non-coding downstream 59423 660358 ~ 680183 (-)
G147305 NA non-coding downstream 307299 428423 ~ 432307 (-)
G147248 NA non-coding downstream 514273 195473 ~ 225333 (-)
G147201 NA non-coding downstream 719216 19601 ~ 20390 (-)
G147420 NA non-coding upstream 62202 802811 ~ 887879 (-)
G147419 NA non-coding upstream 431707 1172316 ~ 1174302 (-)
G147467 NA non-coding upstream 448190 1188799 ~ 1189043 (-)
G147588 NA non-coding upstream 872724 1613333 ~ 1619067 (-)
G147639 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 1079752 1820361 ~ 1829348 (-)
G147324 NA other downstream 254023 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 347124 387118 ~ 392482 (-)
AMCG00000050 NA other upstream 149503 890112 ~ 940835 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other upstream 2811550 3552159 ~ 3558901 (-)
AMCG00000161 NA other upstream 4330858 5071467 ~ 5077246 (-)
G148395 NA other upstream 4598200 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 5263577 6004186 ~ 6012637 (-)

Expression


Co-expression Network