G147466


Basic Information

Item Value
gene id G147466
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 1188808 ~ 1189042 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185557
AAGGATCAAAAAGTGACGTCGCTATGAACGCTTGGCCGCCAGAATCCAGTTATCCCTGTGGTAACTTTTCTGACACNNNNNNNNNNAAACCCAACAAGTCAGAAGGATCGTGAGGCCCTGCTTTCACGGTCTGTATTCATACTGAAAATCAATATCAAGCGAGCTTTTGCCCTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAAGACACCTGCGTTACCNNNN

Function

GO:

id name namespace
GO:0006520 cellular amino acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185557 True 235 lncRNA 0.46 1 1188808 1189042

Neighbor

gene id symbol gene type direction distance location
AMCG00000054 NA coding upstream 24404 1139043 ~ 1164404 (+)
AMCG00000053 vps39 coding upstream 146205 991040 ~ 1042603 (+)
AMCG00000052 NA coding upstream 210264 957706 ~ 978544 (+)
AMCG00000049 NA coding upstream 290263 886906 ~ 898545 (+)
AMCG00000051 NA coding upstream 302016 886400 ~ 886792 (+)
AMCG00000055 NA coding downstream 54156 1243198 ~ 1294765 (+)
AMCG00000056 NA coding downstream 172335 1361377 ~ 1383054 (+)
AMCG00000057 NA coding downstream 504110 1693152 ~ 1719606 (+)
AMCG00000066 NA coding downstream 551767 1740809 ~ 1781771 (+)
AMCG00000067 NA coding downstream 671466 1860508 ~ 1860744 (+)
G147380 NA non-coding upstream 14506 828455 ~ 1174302 (+)
G147393 NA non-coding upstream 119038 904970 ~ 1069770 (+)
G147405 NA non-coding upstream 246897 940858 ~ 941911 (+)
G147314 NA non-coding upstream 703347 482114 ~ 485461 (+)
G147313 NA non-coding upstream 715301 470695 ~ 473507 (+)
G147551 NA non-coding downstream 300538 1489580 ~ 1492313 (+)
G147564 NA non-coding downstream 397015 1586057 ~ 1586324 (+)
G147565 NA non-coding downstream 399035 1588077 ~ 1588295 (+)
G147579 NA non-coding downstream 424268 1613310 ~ 1615951 (+)
G147580 NA non-coding downstream 430130 1619172 ~ 1620075 (+)
G147416 NA other upstream 71858 1063085 ~ 1116950 (+)
G147311 NA other upstream 690297 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 934367 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 1084446 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 1151033 28694 ~ 37775 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 846981 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 1214688 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 2501730 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 2531943 3720985 ~ 3724316 (+)
G148040 NA other downstream 2571137 3760179 ~ 3760624 (+)

Expression


Co-expression Network