G147564


Basic Information

Item Value
gene id G147564
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 1586057 ~ 1586324 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185670
caaaaatgtagatttgagaacaagggcagtaatgttcagactgtacaatgcactagttagacctcatctggaatactgtgtacagttctgggctccacacttcaagaaggatatcgctgctttagaggcagttcagaggagataaaccagacttattccaggtctgaagggaatgtcttactgagagactgagggaactgaaagttttcaccctggaacacagGAGACTACGtagggacttgattcaagtcttcaaaatcatgaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185670 True 268 lncRNA 0.43 1 1586057 1586324

Neighbor

gene id symbol gene type direction distance location
AMCG00000056 NA coding upstream 203003 1361377 ~ 1383054 (+)
AMCG00000055 NA coding upstream 291292 1243198 ~ 1294765 (+)
AMCG00000054 NA coding upstream 421653 1139043 ~ 1164404 (+)
AMCG00000053 vps39 coding upstream 543454 991040 ~ 1042603 (+)
AMCG00000052 NA coding upstream 607513 957706 ~ 978544 (+)
AMCG00000057 NA coding downstream 106828 1693152 ~ 1719606 (+)
AMCG00000066 NA coding downstream 154485 1740809 ~ 1781771 (+)
AMCG00000067 NA coding downstream 274184 1860508 ~ 1860744 (+)
AMCG00000072 mta1,LOC102776995,LOC107741866,LOC107666257 coding downstream 427223 2013547 ~ 2034642 (+)
AMCG00000070 tmem229b,LOC107752730,LOC107708331,LOC102785226 coding downstream 528337 2114661 ~ 2115167 (+)
G147551 NA non-coding upstream 93744 1489580 ~ 1492313 (+)
G147466 NA non-coding upstream 397015 1188808 ~ 1189042 (+)
G147380 NA non-coding upstream 411755 828455 ~ 1174302 (+)
G147393 NA non-coding upstream 516287 904970 ~ 1069770 (+)
G147405 NA non-coding upstream 644146 940858 ~ 941911 (+)
G147565 NA non-coding downstream 1753 1588077 ~ 1588295 (+)
G147579 NA non-coding downstream 26986 1613310 ~ 1615951 (+)
G147580 NA non-coding downstream 32848 1619172 ~ 1620075 (+)
G147635 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding downstream 234033 1820357 ~ 1829543 (+)
G147688 NA non-coding downstream 704816 2291140 ~ 2358137 (+)
G147416 NA other upstream 469107 1063085 ~ 1116950 (+)
G147311 NA other upstream 1087546 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 1331616 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 1481695 55439 ~ 104362 (+)
AMCG00000026 NA other upstream 1548282 28694 ~ 37775 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other downstream 449699 2036023 ~ 2058770 (+)
G147726 LOC104962440 other downstream 817406 2403730 ~ 2403972 (+)
AMCG00000094 NA other downstream 2104448 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 2134661 3720985 ~ 3724316 (+)
G148040 NA other downstream 2173855 3760179 ~ 3760624 (+)

Expression


Co-expression Network