G147726 (LOC104962440)


Basic Information

Item Value
gene id G147726
gene name LOC104962440
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 2403730 ~ 2403972 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185878
gatgaatgcagcaatgtacggAGACATctttgatgaaaacctgctccagagcgctctggacctcagactggggcgaaggttcatcttccaacaggacaacaaccctaagcacacagccaagataacaaaagagtggctacaggacaactctgtgaatgtccttgagtggcccagccagagcccagacttgaacccgattgaacatctctggagagatctgaaaatggctgtgcaccgacgctc

Function

NR:

description
PREDICTED: uncharacterized protein LOC104962440

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185878 True 243 TUCP 0.51 1 2403730 2403972

Neighbor

gene id symbol gene type direction distance location
AMCG00000071 NA coding upstream 267832 2128584 ~ 2135898 (+)
AMCG00000070 tmem229b,LOC107752730,LOC107708331,LOC102785226 coding upstream 288563 2114661 ~ 2115167 (+)
AMCG00000072 mta1,LOC102776995,LOC107741866,LOC107666257 coding upstream 369088 2013547 ~ 2034642 (+)
AMCG00000067 NA coding upstream 542986 1860508 ~ 1860744 (+)
AMCG00000066 NA coding upstream 621959 1740809 ~ 1781771 (+)
AMCG00000074 LOC106602716,LOC107752725 coding downstream 168807 2572779 ~ 2607991 (+)
AMCG00000086 slc25a21,LOC107679800 coding downstream 372695 2776667 ~ 2790487 (+)
AMCG00000088 NA coding downstream 435943 2839915 ~ 2841035 (+)
AMCG00000085 nkx2.1,nkx2-1,LOC107679765,LOC107666245,LOC107582966,LOC107578306 coding downstream 454181 2858153 ~ 2860184 (+)
AMCG00000075 NA coding downstream 672213 3076185 ~ 3107875 (+)
G147689 LOC107575789 non-coding upstream 35285 2301487 ~ 2368445 (+)
G147688 NA non-coding upstream 45593 2291140 ~ 2358137 (+)
G147687 NA non-coding upstream 49672 2350041 ~ 2354058 (+)
G147635 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 574187 1820357 ~ 1829543 (+)
G147580 NA non-coding upstream 783655 1619172 ~ 1620075 (+)
G147735 NA non-coding downstream 74738 2478710 ~ 2478958 (+)
G147739 NA non-coding downstream 121219 2525191 ~ 2525421 (+)
G147806 NA non-coding downstream 606111 3010083 ~ 3016145 (+)
G147807 NA non-coding downstream 616423 3020395 ~ 3021571 (+)
G147808 NA non-coding downstream 618966 3022938 ~ 3023268 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 344960 2036023 ~ 2058770 (+)
G147416 NA other upstream 1286780 1063085 ~ 1116950 (+)
G147311 NA other upstream 1905219 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 2149289 231336 ~ 254441 (+)
AMCG00000025 NA other upstream 2299368 55439 ~ 104362 (+)
AMCG00000094 NA other downstream 1286800 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 1317013 3720985 ~ 3724316 (+)
G148040 NA other downstream 1356207 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 1708148 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 2684467 5088439 ~ 5161195 (+)

Expression


Co-expression Network