G147735


Basic Information

Item Value
gene id G147735
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 2478710 ~ 2478958 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185889
ctaactctgcctcctctccactctccttcctccagagcccgctccttctcatccctggcccctaaatggtggaacgacctgcccaccgaagtcaaaacagcagagtccttgacctcattctggcgcttactcaagacacatcttttccgacagtacttgtaatattagtcctctatccctgctagatagcacttcacagttttatttgcttctcgcgttcttgattgttttcctccttgctccctttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185889 True 249 lncRNA 0.49 1 2478710 2478958

Neighbor

gene id symbol gene type direction distance location
AMCG00000071 NA coding upstream 342812 2128584 ~ 2135898 (+)
AMCG00000070 tmem229b,LOC107752730,LOC107708331,LOC102785226 coding upstream 363543 2114661 ~ 2115167 (+)
AMCG00000072 mta1,LOC102776995,LOC107741866,LOC107666257 coding upstream 444068 2013547 ~ 2034642 (+)
AMCG00000067 NA coding upstream 617966 1860508 ~ 1860744 (+)
AMCG00000066 NA coding upstream 696939 1740809 ~ 1781771 (+)
AMCG00000074 LOC106602716,LOC107752725 coding downstream 93821 2572779 ~ 2607991 (+)
AMCG00000086 slc25a21,LOC107679800 coding downstream 297709 2776667 ~ 2790487 (+)
AMCG00000088 NA coding downstream 360957 2839915 ~ 2841035 (+)
AMCG00000085 nkx2.1,nkx2-1,LOC107679765,LOC107666245,LOC107582966,LOC107578306 coding downstream 379195 2858153 ~ 2860184 (+)
AMCG00000075 NA coding downstream 597227 3076185 ~ 3107875 (+)
G147689 LOC107575789 non-coding upstream 110265 2301487 ~ 2368445 (+)
G147688 NA non-coding upstream 120573 2291140 ~ 2358137 (+)
G147687 NA non-coding upstream 124652 2350041 ~ 2354058 (+)
G147635 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 649167 1820357 ~ 1829543 (+)
G147580 NA non-coding upstream 858635 1619172 ~ 1620075 (+)
G147739 NA non-coding downstream 46233 2525191 ~ 2525421 (+)
G147806 NA non-coding downstream 531125 3010083 ~ 3016145 (+)
G147807 NA non-coding downstream 541437 3020395 ~ 3021571 (+)
G147808 NA non-coding downstream 543980 3022938 ~ 3023268 (+)
G147809 NA non-coding downstream 546420 3025378 ~ 3025789 (+)
G147726 LOC104962440 other upstream 74738 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 419940 2036023 ~ 2058770 (+)
G147416 NA other upstream 1361760 1063085 ~ 1116950 (+)
G147311 NA other upstream 1980199 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 2224269 231336 ~ 254441 (+)
AMCG00000094 NA other downstream 1211814 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 1242027 3720985 ~ 3724316 (+)
G148040 NA other downstream 1281221 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 1633162 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 2609481 5088439 ~ 5161195 (+)

Expression


Co-expression Network