G147739


Basic Information

Item Value
gene id G147739
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 2525191 ~ 2525421 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU185893
gttttccgttttgaatgccttgaagcccaatttccatttgtgtccccgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctccgagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU185893 True 231 lncRNA 0.48 1 2525191 2525421

Neighbor

gene id symbol gene type direction distance location
AMCG00000071 NA coding upstream 389293 2128584 ~ 2135898 (+)
AMCG00000070 tmem229b,LOC107752730,LOC107708331,LOC102785226 coding upstream 410024 2114661 ~ 2115167 (+)
AMCG00000072 mta1,LOC102776995,LOC107741866,LOC107666257 coding upstream 490549 2013547 ~ 2034642 (+)
AMCG00000067 NA coding upstream 664447 1860508 ~ 1860744 (+)
AMCG00000066 NA coding upstream 743420 1740809 ~ 1781771 (+)
AMCG00000074 LOC106602716,LOC107752725 coding downstream 47358 2572779 ~ 2607991 (+)
AMCG00000086 slc25a21,LOC107679800 coding downstream 251246 2776667 ~ 2790487 (+)
AMCG00000088 NA coding downstream 314494 2839915 ~ 2841035 (+)
AMCG00000085 nkx2.1,nkx2-1,LOC107679765,LOC107666245,LOC107582966,LOC107578306 coding downstream 332732 2858153 ~ 2860184 (+)
AMCG00000075 NA coding downstream 550764 3076185 ~ 3107875 (+)
G147735 NA non-coding upstream 46233 2478710 ~ 2478958 (+)
G147689 LOC107575789 non-coding upstream 156746 2301487 ~ 2368445 (+)
G147688 NA non-coding upstream 167054 2291140 ~ 2358137 (+)
G147687 NA non-coding upstream 171133 2350041 ~ 2354058 (+)
G147635 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 695648 1820357 ~ 1829543 (+)
G147806 NA non-coding downstream 484662 3010083 ~ 3016145 (+)
G147807 NA non-coding downstream 494974 3020395 ~ 3021571 (+)
G147808 NA non-coding downstream 497517 3022938 ~ 3023268 (+)
G147809 NA non-coding downstream 499957 3025378 ~ 3025789 (+)
G147814 NA non-coding downstream 509598 3035019 ~ 3036346 (+)
G147726 LOC104962440 other upstream 121219 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 466421 2036023 ~ 2058770 (+)
G147416 NA other upstream 1408241 1063085 ~ 1116950 (+)
G147311 NA other upstream 2026680 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 2270750 231336 ~ 254441 (+)
AMCG00000094 NA other downstream 1165351 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 1195564 3720985 ~ 3724316 (+)
G148040 NA other downstream 1234758 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 1586699 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 2563018 5088439 ~ 5161195 (+)

Expression


Co-expression Network