G147994


Basic Information

Item Value
gene id G147994
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3630582 ~ 3631455 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU186210
CCCAGACCCGCTCAGACCCGCTTGACCTGACTCGGTTCGTCCGGGGCGTCAGGTCGGGCCGGTCGGGCGGGCGGCCGCTCGGCGCTGCTTGCGTCACTCCTGCTAACCTGCCGGGCGGCTGGAGGCGGCGCTGCTCCGTGCGCACAGCGGAGGATGCCATAACAGCGCCCAGACGCAGGGCTTCAGCACAGGGCGTGTGTGTGTCGGTCACCTGGAGCCGCTGCGCCCCCCAGACGTGCGCAGAAAGAGGATCCAAATTCAATCCTTCCACAGCGCACTGCGGAGGCTCCGGCGTCCCTTTCATGGTGATCTCGACGGCCGGCTGCTGCTTTTCGGTGGGAATCGCGGAATATAGGCTGTGCAGTGCCACAGAAAGACGCAGGCGGTGATGGGAGATGTCTGTCTGGGCTCTGGTGCCACTGTCCTGCACCAGCTGCTCTGTCTGCTCGGGTTATTTTCCAAATAATTTCCCCAGTGGATTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186210 True 484 lncRNA 0.64 2 3630582 3631455

Neighbor

gene id symbol gene type direction distance location
AMCG00000083 NA coding upstream 89426 3538688 ~ 3541156 (+)
AMCG00000082 adssl1,pura1 coding upstream 93848 3523600 ~ 3536734 (+)
AMCG00000081 NA coding upstream 160618 3464363 ~ 3469964 (+)
AMCG00000079 NA coding upstream 166276 3443513 ~ 3464306 (+)
AMCG00000078 NA coding upstream 214025 3403359 ~ 3416557 (+)
AMCG00000090 NA coding downstream 16351 3647806 ~ 3680717 (+)
AMCG00000089 NA coding downstream 83209 3714664 ~ 3720675 (+)
AMCG00000102 pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 coding downstream 274967 3906422 ~ 3915953 (+)
AMCG00000104 NA coding downstream 297017 3928472 ~ 3940793 (+)
AMCG00000103 NA coding downstream 326186 3957641 ~ 3976423 (+)
G147856 NA non-coding upstream 334714 3216784 ~ 3295868 (+)
G147842 NA non-coding upstream 491393 3135920 ~ 3139189 (+)
G147814 NA non-coding upstream 594236 3035019 ~ 3036346 (+)
G147809 NA non-coding upstream 604793 3025378 ~ 3025789 (+)
G147808 NA non-coding upstream 607314 3022938 ~ 3023268 (+)
G148010 NA non-coding downstream 56508 3687963 ~ 3688231 (+)
G148036 NA non-coding downstream 96870 3728325 ~ 3759003 (+)
G148075 NA non-coding downstream 244916 3876371 ~ 3879521 (+)
G148119 NA non-coding downstream 380199 4011654 ~ 4013403 (+)
G148143 NA non-coding downstream 529400 4160855 ~ 4162311 (+)
G147726 LOC104962440 other upstream 1226610 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 1571812 2036023 ~ 2058770 (+)
G147416 NA other upstream 2513632 1063085 ~ 1116950 (+)
G147311 NA other upstream 3132071 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 3376141 231336 ~ 254441 (+)
AMCG00000094 NA other downstream 59317 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 89530 3720985 ~ 3724316 (+)
G148040 NA other downstream 128724 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 480665 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 1456984 5088439 ~ 5161195 (+)

Expression


Co-expression Network