G148119


Basic Information

Item Value
gene id G148119
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4011654 ~ 4013403 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU186359
TCAAGCttgttaacaaaatgtatttccccctctccccattAAAATAACTCATGCCAcagacattaaaatacaattccagCATTTTCATTTGACATTACCATAAGATTTTACTTTGGAAGATGACAGAAAGACGTTTCCCACAacctcaataaaacaaaataaaataaaaaaaaagcatagtgTTTTCTACcttacataataattaattacttttatataacaaatattttatatggtGCAtggtttgaaaataataaaaaaatataacattccAAAATTGTTCTAAATCATTGCAGACAAGAATTAGTCCGGAGAGCTAAAGGTCTTTTTTTAagtgcttatatatatatatatatatatatatatatatataagaataagCATGCAACCCATCAGGTATATTGttctaaataatatatttagtgTTATAGTTTGATTGCTGCTTTATTcattattagattattttaacagtttttggACAGTGTAAATTATGACTAGTGTATAATGTAGTGCAGaagataacaacaacaaaaaaaagcctACCTCTAAActtcttttggttttgttgggTTTTTGGGTAAGTTCAGAAATATGTAAGCAAAGAGCATtaattctgtaaaacaaatataaattcaaattcacATAGTTAATATATCCTTATTGTCTTGTGagatacaattattatatatatatattacattagcTTTCCCTTTATCCTTATTAACCAAGTTACATGCAAATACTAACCAGTTGCTTGTTTTActcaaatatgtttatatagaTGCAATCTGTAAGTCTTTGGAATGAGTGTCCCCATTTTCTAGTTCTGCTCCCTTTATCATTAAAGCCTTTTTTACTTTAGCCTTTTCCTTGGACAAAGAGTGCTGTCAGCCAGTTATAGTTAAATTTgcttcaaattaattaatctcttGTTCCATAGTAATGCAATTACAGACAGCATTTGCGGATGATCTTTGTGGCATTTACCGCTTCACTGCTGCAGATGGCCTGATATAAAGGCATaatgcttttcttattttttgtaaaactaGGTTAGTGGCTATATCTTCACTCATTCATAATCATtctttacactttaaaaacatacttGGAAAGGGAATGAGCTGCTTAAGATATATAATCATTGTCTTTTAAAGCAACTGCACATTACACAACATGTTAAAATATCACTCTCTCTGAGACTGTTAGGGTTTATTTGGAGgaagtgtttttcagtttctgtaaTGTTGAGAATTGTGATTCAGGTTGGTACCTGCTTAATGAAACATAGTACAGTACTGTCAaggttttcatgtttaaattttaaaactTTGTAAATCATTTAGTCAACCTACTTTTTTGTACCCCTTTATGTGGCCTCTCCACCCTACTGCTGCAGGTATACGAACTGCAATAAATAAGCCTGACACTAACCCATATTTCTTTCcctgaattaaaatgtacaatgaataaatgtatcaaaatcAATGATTAAGTTCCCACACCCCAATGATAAAACACCACCAAGGTTAAAGTGGGTCTAGCCTAGATAGACATTCCCGTAATCGCTACCGTCCCCCTGGTCACCATTGGCcgtcttctcctcctctttgtCCACCTGGTCTGGGTAGTGGGGGCTGACACACGAGTTCACGGTTTCTCTGACATGGCTGGGAAGGCCCTTCATCTTCTTGTCATATTCAGAGCTGGCTTCCTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186359 True 1720 lncRNA 0.33 2 4011654 4013403

Neighbor

gene id symbol gene type direction distance location
AMCG00000109 myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 coding upstream 2366 3998178 ~ 4009288 (+)
AMCG00000103 NA coding upstream 35231 3957641 ~ 3976423 (+)
AMCG00000104 NA coding upstream 70861 3928472 ~ 3940793 (+)
AMCG00000102 pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 coding upstream 95701 3906422 ~ 3915953 (+)
AMCG00000089 NA coding upstream 290979 3714664 ~ 3720675 (+)
AMCG00000108 NA coding downstream 30709 4044112 ~ 4071434 (+)
AMCG00000114 NA coding downstream 118226 4131629 ~ 4135410 (+)
AMCG00000112 NA coding downstream 178431 4191834 ~ 4225082 (+)
AMCG00000111 NA coding downstream 230245 4243648 ~ 4280265 (+)
AMCG00000110 NA coding downstream 311106 4324509 ~ 4354247 (+)
G148075 NA non-coding upstream 132133 3876371 ~ 3879521 (+)
G148036 NA non-coding upstream 252651 3728325 ~ 3759003 (+)
G148010 NA non-coding upstream 323423 3687963 ~ 3688231 (+)
G147994 NA non-coding upstream 380199 3630582 ~ 3631455 (+)
G147856 NA non-coding upstream 715786 3216784 ~ 3295868 (+)
G148143 NA non-coding downstream 147452 4160855 ~ 4162311 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding downstream 160034 4173437 ~ 4175716 (+)
G148200 NA non-coding downstream 568908 4582311 ~ 4582551 (+)
G148396 NA non-coding downstream 1340548 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 1369165 5382568 ~ 5388814 (+)
G148040 NA other upstream 251030 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 287338 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 312561 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 1607682 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 1952884 2036023 ~ 2058770 (+)
AMCG00000113 NA other downstream 98717 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 1075036 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 1293787 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 1321110 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 1421755 5435158 ~ 5454206 (+)

Expression


Co-expression Network