Gene
RNA
| Item | Value |
|---|---|
| gene id | G148143 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 4160855 ~ 4162311 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU186388 | True | 694 | lncRNA | 0.37 | 2 | 4160855 | 4162311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000114 | NA | coding | upstream | 25445 | 4131629 ~ 4135410 (+) |
| AMCG00000108 | NA | coding | upstream | 89421 | 4044112 ~ 4071434 (+) |
| AMCG00000109 | myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 | coding | upstream | 151567 | 3998178 ~ 4009288 (+) |
| AMCG00000103 | NA | coding | upstream | 184432 | 3957641 ~ 3976423 (+) |
| AMCG00000104 | NA | coding | upstream | 220062 | 3928472 ~ 3940793 (+) |
| AMCG00000112 | NA | coding | downstream | 29523 | 4191834 ~ 4225082 (+) |
| AMCG00000111 | NA | coding | downstream | 81337 | 4243648 ~ 4280265 (+) |
| AMCG00000110 | NA | coding | downstream | 162198 | 4324509 ~ 4354247 (+) |
| AMCG00000121 | NA | coding | downstream | 523278 | 4685589 ~ 4705926 (+) |
| AMCG00000120 | NA | coding | downstream | 594673 | 4756984 ~ 4760814 (+) |
| G148119 | NA | non-coding | upstream | 147452 | 4011654 ~ 4013403 (+) |
| G148075 | NA | non-coding | upstream | 281334 | 3876371 ~ 3879521 (+) |
| G148036 | NA | non-coding | upstream | 401852 | 3728325 ~ 3759003 (+) |
| G148010 | NA | non-coding | upstream | 472624 | 3687963 ~ 3688231 (+) |
| G147994 | NA | non-coding | upstream | 529400 | 3630582 ~ 3631455 (+) |
| G148146 | mthfd1,LOC106952296,LOC105908326,LOC103136077 | non-coding | downstream | 11126 | 4173437 ~ 4175716 (+) |
| G148200 | NA | non-coding | downstream | 420000 | 4582311 ~ 4582551 (+) |
| G148396 | NA | non-coding | downstream | 1191640 | 5353951 ~ 5354185 (+) |
| G148402 | NA | non-coding | downstream | 1220257 | 5382568 ~ 5388814 (+) |
| G148452 | NA | non-coding | downstream | 1378368 | 5540679 ~ 5544478 (+) |
| G148040 | NA | other | upstream | 400231 | 3760179 ~ 3760624 (+) |
| AMCG00000093 | srp14,LOC106610862 | other | upstream | 436539 | 3720985 ~ 3724316 (+) |
| AMCG00000094 | NA | other | upstream | 461762 | 3690772 ~ 3699093 (+) |
| G147726 | LOC104962440 | other | upstream | 1756883 | 2403730 ~ 2403972 (+) |
| AMCG00000073 | mta1,LOC107679789,LOC107666257,LOC107600838 | other | upstream | 2102085 | 2036023 ~ 2058770 (+) |
| AMCG00000136 | btbd7 | other | downstream | 926128 | 5088439 ~ 5161195 (+) |
| AMCG00000145 | NA | other | downstream | 1144879 | 5307190 ~ 5314953 (+) |
| AMCG00000146 | NA | other | downstream | 1172202 | 5334513 ~ 5340550 (+) |
| AMCG00000142 | NA | other | downstream | 1272847 | 5435158 ~ 5454206 (+) |
| AMCG00000166 | srsf5,LOC106602985,LOC106611464 | other | downstream | 1718712 | 5881023 ~ 5888027 (+) |
