G148200


Basic Information

Item Value
gene id G148200
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4582311 ~ 4582551 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU186462
gatgtgttagaagcaggaaatatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggcttgacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagtggtgaaccggcgacagggtcatgggcggccaaggctcattgatgtacgtggggagcaaaggctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186462 True 241 lncRNA 0.53 1 4582311 4582551

Neighbor

gene id symbol gene type direction distance location
AMCG00000110 NA coding upstream 228064 4324509 ~ 4354247 (+)
AMCG00000111 NA coding upstream 302046 4243648 ~ 4280265 (+)
AMCG00000112 NA coding upstream 357229 4191834 ~ 4225082 (+)
AMCG00000114 NA coding upstream 446901 4131629 ~ 4135410 (+)
AMCG00000108 NA coding upstream 510877 4044112 ~ 4071434 (+)
AMCG00000121 NA coding downstream 103038 4685589 ~ 4705926 (+)
AMCG00000120 NA coding downstream 174433 4756984 ~ 4760814 (+)
AMCG00000128 LOC107698615,LOC107568572 coding downstream 213818 4796369 ~ 4803426 (+)
AMCG00000126 NA coding downstream 224617 4807168 ~ 4809507 (+)
AMCG00000127 NA coding downstream 255034 4837585 ~ 4843986 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 406595 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 420000 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 568908 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 702790 3876371 ~ 3879521 (+)
G148036 NA non-coding upstream 823308 3728325 ~ 3759003 (+)
G148396 NA non-coding downstream 771400 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 800017 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 958128 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 1095432 5677983 ~ 5678620 (+)
G148468 actn1,LOC100696265,LOC101469024,LOC106600942 non-coding downstream 1133042 5715593 ~ 5719481 (+)
AMCG00000113 NA other upstream 389278 4112120 ~ 4193033 (+)
G148040 NA other upstream 821687 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 857995 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 883218 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 2178339 2403730 ~ 2403972 (+)
AMCG00000136 btbd7 other downstream 505888 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 724639 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 751962 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 852607 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 1298472 5881023 ~ 5888027 (+)

Expression


Co-expression Network