G148364


Basic Information

Item Value
gene id G148364
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5236868 ~ 5240683 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU186704
cccagttgtttcatttaattaaaaaaaaagtcaccaaaatttagatttttttttccttttgctttgtttttctcataGAACGGATAAATaaaattatcataattaaaatttaaaaaaaaaaaaacctcaagaGCAAACATTCAGTGGAAGTTGATCAGGTAAGGAAGTGGTcaggtaagagagagagaacgagggATGAATGACACTTTCCCATTTAAGCACaataaacaagaacacaatATGCACTTGTGGGTTCAGCAGTATACACAACAGtgaacaccaaaaaacaaacaaaaaaaaaacctcttggCATATTAGTCTCCCCGGAATGAgtcttttttaatctcaggTAACACTCCCCCCCCGCCTACACTTTCAGTTCATGGCCTACAGTCCTCAGCCTattgttgttaatttatttttctctgcaggacacattttcattttgttcctcaggcttacatatatatatatatatatataataaagtaatGTCAATctatttggaaaataataattacaaacaaatcTCACAGTGAACATCTGAATATAAAATCATGGGTGTTCTTCTTTTTGTCAGTCCAAAACTGTGTAGGCTGCATTCTTAACAAGATACTGCTGTTAttcatgaattaatgaattcattaatgtatttgtgtatttattttcctaacatCTTCATCAAAGGCGAGCAAGACAGGTTTTGTTATTGTCAATCTGATATTGACCTGTGCTGATTTAACACCAGATCTTTTCGTACAACACTCACAGAGATAAAGAAAGCCCTAGACTTGATATACACACACCTCCCTGTCTTCCCTATATACGCCTTCTTCTCCTCTCCCAAGCTGTGCAGTGGTCAGCATTACCAAgctgagtaaaaaaaaaatgcaactgtgGGCAAGATTACTGGCAGATTGAAATGTTATAGAATGAAACCTTGATCCTCATTTCCTTTATTCTCTCCCAGAGTTTACAAAATTGATCATATATAAATTCTGGTCCACAAAATCCAAGAATCAacataatgtgtatttaaatgtatatacatgtgtgtgccATAAcacatgctttgtttttgtttgtatttaatcatacaAGTTAATTAATATTCTGTAGAGTTTTAGGGTAGTCGATTTTCCTTTAGTTGTATAATGTGCGTACACaacagatacaaataataatgatcttgattaagacttttttcttttttttttttttacacaaatctctgtgtgtaaaaaaaaataaacaaaaccaagaaacCTAATAATGCCAATAGCAACGATGCCAAACCATTAATGCTACAAACCCAACCTCAACCCACTGAGAACTGTAAAAAGCATTGTGTGCCTCAAATCTGAGTGGAGTGAGGTGAACAAAACATCCAATATACCATTCTGGAGTAAGTATGAAGTTCAATGCCCTTTGTGTGAAGTgccaacaaaatacaaaccactAGCAAATGATGCAGGAATTACAGGAAGAAGACAAGGAATGGAATCTCCCCTACTTCACAATTGTTGACAAGTATCCACAAAttcctgaataataataataataataatatatatatatatatatatgaaccaaaaatatatttcttcttgACAACCTCTGAGTAACAGGCTGAGACCACAATGGAAACGTCTGTTAAATAAGCATTCagaaagaatgagaaaaaaatcaaGTTTTCTGCTGAATTGGAACATGCTGGGTTTTTGAGGGTAATTTATCTGAGGTGGTGTGTTTGATCAGTCATAGGTTTATCAGTGTAGAAGGGCCCAGCATAACCGTTACAGCCATCAGGAAAACAATGCAGTGTAGTTTCATGCGCTATACAGTTTCTTTCTTAACGTATGCAGGGGAGCAGTGTGGTTTTTCAGATATTTGTTCAGTCAAATCACTCATCCTTTCATTGAACTGGCTGTTTGTTTAAACGGTCTGAAGCTTTAGTTAACTGCCAGACatctttaaaacacttttttttttaaattagtaaagTCCTGAAGAACGTAAACAGCCAACCTGTTAAAGTAGAACCTATTTTCCCAAGACATGCTACTGTAACAGGAAATTACATCACTTTTATTCCACCAATCCGCAATACAGCTACTGCAAATGTTTTCTTAGCTTCCTTAGTTTTCATCATTAGCACACTATGTGCCTTTCCTGTACAGAGAGGAGTCGTGTTACATACAGTAGGTCATACTGTAATTGTGAGCATTTCACGGTAAAATAACCCAGAAGGTTAGATGTAAGATCTCATTAACAATCATCTAAAAAGCAGCCGCAAAATGAatcattacattgttttctttaaataatcaTTATCCTGGCACACATTGCAAAGAAAATGTCCCTGACAGgctcaattttgtattttgttttatttttgttgattatGTGAGACAAGTTCTTAATTTGTCTGTGCGTTTCTGTGGCCTTTACTCAAAGTGAAGAAGCTCAAgtttgaaatttgtattttcctgCTGCAAAGGTTACAGCTCAGTTGAGTGATAATGATCAAGTTTTAACAAGAGGGACAAGTTAGCTGCACTAACATGTACGGATACGTCACCTCTGTAGCAGCAATAGAAAAGGgcataatttgtgtgtgtgtgtgtgtgtcttgttgTGAAAATACTTTGTGTAAAAGGTCATGTGATTTCTCCCAAAGTAAGAtcttcagatacatttttccattGTGCAAATAAACACAGTTACGATGTGGTTAATCTCTAGCCATGGTAATTCAGGTGCAAGGATGAGTGTGTAAGGATTCCTATGGAGAATAGCGaggggaaaataattaatttctctgCTACAACGCTGTGTTCAAGTCTCTTAGGCTACTTCAAGTCCACTACCAGCACATTTAGACGGGGGGTTACTGCGGATCTGGTTTTATAtctcacagaaaaacaaaacaaattaaaaacaataatttacagGAATTAAAAGTCACATTTTGGAGAAGCTGAAAGTGAAAAcattgtgtattatatttaaggAGTGCCCTTGTCTGCTTTACTCTCTAACAGCATTGATATCTTGTCTCTAGTGTTTAAACCATTGGATTCTATTCTAATCCCATCCCTTTGTATATGAtttgagatacaaaaaaacaaaaaaagaaatttaACCTAAACCACAaggatgggaaaaaaaaaaaaaaaaagattaaaaggaaaacaataatacaattaagcgTATGAGCTCAAAGTGAGTTCTCAAGTCCCCATAGAAGTCCTattgaactaaaaataaaaataaatcccaatTCATCATCAGAAAAGGTATTGTTTCACTTGCTTTGATTACGGATAGATTTATACTTGTTGTTCACTTGGGAAAAACTGGTCATTGTGAGGAGGCTTTTGTGGCTATTGTGGCCACGCAGTGCTGCTGGAAATTAGGGGACACCGCCGAATTGCAGCCCAGTCTCTGGTGAGAGGTCTTTTTGCCACTCTCTCCTTCCACGATCCAGGGGTGGCCGTCTTTTCCCAGCATGCTGCAGCAGCCTGTGGGCGTGCCGCAGCCACGGTCCGCCGAAGCCATGAGGACGCTGGGCAGCTGCTCTGCGGCACTGCCGTTGACGGGCGCAGCCGGCACCTCGGGGCTCTGCAGGACTGTCGTGATATGGTCCAGCAAGTCACTGAAGAATTCGGGGACTCCTTCATAGCCTGTCCAGACAAAAAGGAATGGCGAGGTTAGACGCAATTCACTTTACTGTGATGCTTTGTCTTAGATAAAGGTGTCTTTAAATTAACTTGCTGAGTG

Function

GO:

id name namespace
GO:0019200 carbohydrate kinase activity molecular_function

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU186704 True 3783 lncRNA 0.37 2 5236868 5240683

Neighbor

gene id symbol gene type direction distance location
AMCG00000138 NA coding downstream 61749 5159727 ~ 5175119 (-)
AMCG00000160 NA coding downstream 170043 5000865 ~ 5066825 (-)
AMCG00000134 NA coding downstream 343501 4892489 ~ 4893367 (-)
AMCG00000131 NA coding downstream 376379 4843992 ~ 4860489 (-)
AMCG00000129 NA coding downstream 399318 4807171 ~ 4837550 (-)
AMCG00000140 NA coding upstream 2345 5243028 ~ 5256388 (-)
AMCG00000150 NA coding upstream 33992 5274675 ~ 5285432 (-)
AMCG00000149 LOC107721334,LOC107659197,LOC107585782,LOC104966051 coding upstream 52505 5293188 ~ 5306080 (-)
AMCG00000151 NA coding upstream 71800 5312483 ~ 5319529 (-)
AMCG00000144 NA coding upstream 157704 5398387 ~ 5407241 (-)
G148198 NA non-coding downstream 688808 4547824 ~ 4548060 (-)
G148181 NA non-coding downstream 1005540 4230642 ~ 4231328 (-)
G148041 NA non-coding downstream 1476251 3760302 ~ 3760617 (-)
G148011 NA non-coding downstream 1548637 3687963 ~ 3688231 (-)
G147997 NA non-coding downstream 1594199 3642365 ~ 3642669 (-)
G148400 cdca4 non-coding upstream 137066 5377749 ~ 5380128 (-)
G148416 NA non-coding upstream 210317 5451000 ~ 5454248 (-)
G148417 NA non-coding upstream 214563 5455246 ~ 5455489 (-)
G148486 NA non-coding upstream 470336 5711019 ~ 5711876 (-)
G148610 NA non-coding upstream 907246 6147929 ~ 6148286 (-)
AMCG00000161 NA other downstream 159622 5071467 ~ 5077246 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other downstream 1677967 3552159 ~ 3558901 (-)
AMCG00000050 NA other downstream 4296033 890112 ~ 940835 (-)
G147324 NA other downstream 4751285 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 4844386 387118 ~ 392482 (-)
G148395 NA other upstream 98126 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 763503 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 804982 6045665 ~ 6067184 (-)
AMCG00000168 gchfr,LOC106583112 other upstream 910037 6150720 ~ 6154301 (-)
AMCG00000189 NA other upstream 966831 6207514 ~ 6209957 (-)

Expression


Co-expression Network