G148851 (gpx2)


Basic Information

Item Value
gene id G148851
gene name gpx2
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 7361222 ~ 7362692 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187302
CCAtctgttgtctttattttagtttaattcacATAAAGCAATGTTACAGAAGAGTTGGGGAGTGCATAATCCATCACTTTTTAACCTTAACAGGGCTTCAGGTATCATTCCCAGGTTATTTAGAATAATACCTTCATTAAGTTAGATTCAAAAGTATACAGATTATATCATTCTACTTTATCACATCAGAATGgatccctctgtctgtgtccacACTGCGGAGCTATGGCCTGCATTTAACAAGCGGAcagaaaccttttttattttcttctttttctacTTTGTTAGTTTTAACAGTCGCTGGATGTCCGGTTCAATGTCAATGGTTTTAAAGTTCTTGCTGTATCGTTTGAAGGGTTCTCCTTCAGGGCCTATGAGGAACTTCTCGAAATTCCAGGACACGTCGTTCCTGCTGATGGGGCTCCAGATGAGAAACTGGGGGTTTTGCATGAAGGAGGTCTGGTCGTCGTCGGGGTAAGGGAGTTTCGCTTTCAAATAGGCGAAGACAGGGTGGGTGTTTTCTCCATTTACCTGACATTTCTCGAACATGCTGAAGTTGGGCTGGAAACCTCCTCCCGGACGAACGTGCTTCAGGGAACTCAGGATTTCCTCATTCCCACAGTTTTCCTGCTCCAAATTGATTGCAGGGGAAAGCCAGCACCACGAGCCGATGAGGGTACCGGCCCTGCAGCTCGTTCAGCTGGGTGAAGTCCCTGGTGGTGGTTCCTCAGAGGGACGCCACATTCTCAATCAGGACCACCCGGCCCCTGAAGACATTGAAGTCCACAACCTCTCCATCCAGTGTCTTGGCACTGAGATCATAGAAGGTCTTTGCAATGTAGGCCATCGGTCCTGCTGGGCACCAAAC

Function

symbol description
gpx2 Is expressed in otic sensory epithelium. Orthologous to human GPX2 (glutathione peroxidase 2).

NR:

description
PREDICTED: glutathione peroxidase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187302 True 868 TUCP 0.47 2 7361222 7362692

Neighbor

gene id symbol gene type direction distance location
AMCG00000219 LOC108424508,LOC106571088,LOC107668263,LOC105024336,LOC103359368,LOC106608156 coding downstream 24339 7325944 ~ 7336883 (-)
AMCG00000218 NA coding downstream 57285 7296829 ~ 7303937 (-)
AMCG00000231 NA coding downstream 92979 7261606 ~ 7268243 (-)
AMCG00000229 NA coding downstream 111870 7239764 ~ 7249352 (-)
AMCG00000230 NA coding downstream 135848 7212531 ~ 7225374 (-)
AMCG00000212 LOC106531797,LOC108424513 coding upstream 219421 7582113 ~ 7585199 (-)
AMCG00000236 NA coding upstream 231567 7594259 ~ 7619197 (-)
AMCG00000237 zfyve1,LOC107721321 coding upstream 290751 7653443 ~ 7662995 (-)
AMCG00000222 NA coding upstream 323249 7685941 ~ 7689956 (-)
AMCG00000223 NA coding upstream 381889 7744581 ~ 7746668 (-)
G148801 NA non-coding downstream 220254 7140362 ~ 7140968 (-)
G148610 NA non-coding downstream 1212936 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 1649346 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 1905733 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 1906974 5451000 ~ 5454248 (-)
G148962 NA non-coding upstream 395990 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 593280 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 941127 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 1166375 8529067 ~ 8583456 (-)
G149075 NA non-coding upstream 1210390 8573082 ~ 8575086 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 797917 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 1144781 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 1151265 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 1206921 6150720 ~ 6154301 (-)
AMCG00000177 NA other downstream 1294038 6045665 ~ 6067184 (-)
G149011 NA other upstream 733273 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 1663648 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 1807391 9170083 ~ 9188266 (-)
G149321 NA other upstream 2125187 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 2177919 9540611 ~ 9541259 (-)

Expression


Co-expression Network