G149002


Basic Information

Item Value
gene id G149002
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 7955972 ~ 7956264 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187485
tgtgcagtgaaattgagaatcatttaaactaggaaccaggggggcagggagctctgacaatgggagatgttccactaaggaaagaaaaccaagggaaactgccagtaggaaagtcctgaaatgtttgtacctcaatgccaggagtataaggaacaagatgttagacttggaagccacagtgctggcgtgtgactatgatgttgtaggagtgacagaaacatggcttacagaaaatgatggggatgaatacaagttggaaggatacacacagtttaggagagacaggcaaaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187485 True 293 lncRNA 0.44 1 7955972 7956264

Neighbor

gene id symbol gene type direction distance location
AMCG00000240 NA coding downstream 41540 7898317 ~ 7914432 (-)
AMCG00000239 NA coding downstream 63822 7886490 ~ 7892150 (-)
AMCG00000226 NA coding downstream 108628 7841415 ~ 7847344 (-)
AMCG00000224 NA coding downstream 187712 7760630 ~ 7768260 (-)
AMCG00000225 NA coding downstream 202406 7746823 ~ 7753566 (-)
AMCG00000253 stxbp6 coding upstream 712637 8668901 ~ 8687083 (-)
AMCG00000254 NA coding upstream 773021 8729285 ~ 8734548 (-)
AMCG00000242 fermt2 coding upstream 795413 8751677 ~ 8771216 (-)
AMCG00000243 NA coding upstream 831841 8788105 ~ 8814916 (-)
AMCG00000241 bmp4 coding upstream 896955 8853219 ~ 8863951 (-)
G148962 NA non-coding downstream 197009 7758682 ~ 7758963 (-)
G148801 NA non-coding downstream 815004 7140362 ~ 7140968 (-)
G148610 NA non-coding downstream 1807686 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 2244096 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 2500483 5455246 ~ 5455489 (-)
G149030 NA non-coding upstream 347555 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 572803 8529067 ~ 8583456 (-)
G149075 NA non-coding upstream 616818 8573082 ~ 8575086 (-)
G149077 stxbp6 non-coding upstream 712752 8669016 ~ 8739984 (-)
G149087 NA non-coding upstream 787607 8743871 ~ 8744499 (-)
G148851 gpx2 other downstream 593280 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 1392667 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 1739531 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 1746015 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 1801671 6150720 ~ 6154301 (-)
G149011 NA other upstream 139701 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 1070076 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 1213819 9170083 ~ 9188266 (-)
G149321 NA other upstream 1531615 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 1584347 9540611 ~ 9541259 (-)

Expression


Co-expression Network