G149125


Basic Information

Item Value
gene id G149125
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8851316 ~ 8851779 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187631
TCACTTTCATCTGCCTGTTAATTCCTCTTTCTTGTTACATGTCTGtctatttatatttgttcattGTGATTCTCTGTCATTGTTTCGccttaaattactttaattacatgactgaaactatttaattaaaaatgtatgtttcaaaGTCTCCTCGCATATGAGGAAGGAGAAGTACTGCAAAGtaaagataaaagaaaatcttcaacggaaaaaagaaaagaggaagcAGAATGGAAAAAGCATATTCTTATTATAGCCACTAAGGCCCAGCgtgcacatttttatatttgttttacactcATTTGCAACTCCAGAAACACTAAGATGCAATTCTAAGCAGAAACAAGGGAGAATCAGACTGAACAAAATACAGATGACCAAATAAgtaagaaaatgtgaaatgtgtaaaaatgatattTAAATAGAATAGTTTATAACCAAAGAAGTTTGGTTTAATGCCTTTg

Function

GO:

id name namespace
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187631 True 464 lncRNA 0.31 1 8851316 8851779

Neighbor

gene id symbol gene type direction distance location
AMCG00000243 NA coding downstream 36400 8788105 ~ 8814916 (-)
AMCG00000242 fermt2 coding downstream 80100 8751677 ~ 8771216 (-)
AMCG00000254 NA coding downstream 116768 8729285 ~ 8734548 (-)
AMCG00000253 stxbp6 coding downstream 164233 8668901 ~ 8687083 (-)
AMCG00000240 NA coding downstream 936884 7898317 ~ 7914432 (-)
AMCG00000241 bmp4 coding upstream 1440 8853219 ~ 8863951 (-)
AMCG00000257 gch1 coding upstream 94884 8946663 ~ 8961375 (-)
AMCG00000265 NA coding upstream 111189 8962968 ~ 8977588 (-)
AMCG00000262 NA coding upstream 125845 8977624 ~ 8984923 (-)
AMCG00000264 NA coding upstream 136536 8988315 ~ 8989445 (-)
G149087 NA non-coding downstream 106817 8743871 ~ 8744499 (-)
G149077 stxbp6 non-coding downstream 111332 8669016 ~ 8739984 (-)
G149068 NA non-coding downstream 267860 8529067 ~ 8583456 (-)
G149075 NA non-coding downstream 276230 8573082 ~ 8575086 (-)
G149030 NA non-coding downstream 547101 8303819 ~ 8304215 (-)
G149132 NA non-coding upstream 30869 8882648 ~ 8945588 (-)
G149268 pygl,LOC104938237 non-coding upstream 509553 9361332 ~ 9363435 (-)
G149322 NA non-coding upstream 638490 9490269 ~ 9490806 (-)
G149324 NA non-coding upstream 642380 9494159 ~ 9496132 (-)
G149325 NA non-coding upstream 644454 9496233 ~ 9496585 (-)
G149011 NA other downstream 744477 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 1488624 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2288011 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 2634875 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 2641359 6207514 ~ 6209957 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 174561 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 318304 9170083 ~ 9188266 (-)
G149321 NA other upstream 636100 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 688832 9540611 ~ 9541259 (-)
G149395 NA other upstream 904602 9756381 ~ 9766794 (-)

Expression


Co-expression Network