G149268 (pygl,LOC104938237)


Basic Information

Item Value
gene id G149268
gene name pygl,LOC104938237
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9361332 ~ 9363435 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187809
TTgcttataaacatttattgaagCGACAGTACAGAATGCTACAGATTGAAAAGACATTACTGCGACATTGACATTGCCCCTAAATACACTGCTAGTGTCAGAATTCAGATTCACCAATTCTTTCTTCCAGTATAGAAACACTTTCAGGAAGACGTTATGCTCTATAAACACTGGTTGAGCGTCCATTAAGTGCAAAtctaatgcatttcaaacaagGGAGTGAGGGGGAAACCAAAGAAAAGACCACAGAATGAGTGCTCTGGGTCAGAAAATGCAGGTGCATACTGCCTTAAGATGCAAGAACAGTCAATACTGACCATTCAATTTCCTAGTTCAAGCAGTTCTGCATTTACAAAGTACCTCAACTGAAAGAACCGAATGAAATGGAAAACCAGAGTAGCACTTTAGTCACTATTGACAAAGCTGCAGAATGTAGCCCTCCTCGCTCTCTCCTCCAGTAACTCTGCCCACGAGATAACGGGCTACACCTTCTTGGGCTTCACAGCTCTAGCCGTCTGATCAATGGCCTCTCGCGGCTCATTGGGCGGTGGGATCTTCAGGTCCGTTGGCTCCACTCCCCAGATATCCTGAGCGTACTCTGCGATGGTCCGGTCACTGGAGAACTTCCCAGAGgctgcaatgtttttaattaccatCTTGGTCCACTCCTTTGTATTGGAAGAGTTTACTGACCCTCTCTTGGCATTTGACATAAGCTTCATAGTCTGCAAAGACTTTAAACCTGGTTTGGGAGTGggggagagaaattaaaatgtgattatgcAGCTCAAAAGGACAAATAGCATCAATTTTAGGTACCAGGGATTCAGGCAACAAGCATAACCTTGGTACAGCACCTACCTATCATGGTTGAAGAGCATGTTGGTGAGATCATTGAAGAGGTCAGGCTGCTTTGGGGAGAAGAATCCATTCTTGATCTGGTCCATCACTTGTTTCAGTTCAGGTAGCTCACTGTAGTACTTCCTGGCATCATAGCTGAGGAGACGAGATGTCGCTTATCTTTATGGGCTTCTACTTTAAAGCAGTTGCAGCGATTTACCAGCAGATCAGTCACCTTCAAAATTGCTTGACAACATAAACACAAGGACGCACACTACACCCTCTTTACAAACGGGACCCTTACCCCTTCTTGTCAAGTTCTGCTACATCATCCACCCGCATGCCAAAAATGAAAAGGTTCTCCTCGCCAGCCTCCTCTGCCATCTCCACATTGGCTCCATCCATGGTGCCAATGGTCAGTGCTCCATTCAGCATGAACTTCATGTTCCCTGTCCCAGAAGCCTCTGTGCCCGCTGTGGAGATCTGCTCTGACAGATCTGTGGCAGGGATCactTTCGGCTAGAGACACTCTGTAATTCTCCAGATAGATGACCTTCAGCTTACTTCCGATCAGCGGGTCATTGTTCACAACTTCTGCCACAGACGTGATGAGTTTAATGATGAGCTTTGCCATGTGGTAACCTGGGGCTGCCTGTGGAGAGTCTTTGCCACCAATGATCACTGTCCGAGGTACAAAAGGTGCTGTTGGGTCCTTTCTTATACCTAAACAAAGGTGGGGGGACAACATCAGATAATTGCACAATCGAATcagagtttaaaaaaattagCTCCTAGACGACTTACGGTTATACATGGTGACAATGTGCAGGCAGTTGAGGAGCTGCCTCTTGTACTCGTGGATCCTCTTCACATGGAcatcaaacatggaggagggaTTGATCTTCACCTTGTACTCCTGCTCCAGATACTGAGAAAACTTCAACTTATTGTCCTG

Function

symbol description
pygl Predicted to enable glycogen phosphorylase activity and pyridoxal phosphate binding activity. Predicted to be involved in glycogen catabolic process. Predicted to act upstream of or within glycogen metabolic process. Predicted to be active in cytoplasm. Is expressed in eye; heart; kidney; liver; and muscle. Human ortholog(s) of this gene implicated in glycogen storage disease; glycogen storage disease VI; and lactic acidosis. Orthologous to human PYGL (glycogen phosphorylase L).

NR:

description
PREDICTED: glycogen phosphorylase, liver form

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187809 True 1795 lncRNA 0.46 4 9361332 9363435

Neighbor

gene id symbol gene type direction distance location
AMCG00000275 NA coding downstream 72120 9284358 ~ 9289212 (-)
AMCG00000272 frmd6,LOC102777289 coding downstream 150681 9194617 ~ 9210651 (-)
AMCG00000269 cunh14orf166,zgc:56576,LOC107725214,LOC107680004,LOC107693089,LOC107583671 coding downstream 195695 9157860 ~ 9165637 (-)
AMCG00000267 NA coding downstream 244664 9108437 ~ 9116668 (-)
AMCG00000268 NA coding downstream 261855 9093090 ~ 9099477 (-)
AMCG00000276 NA coding upstream 735 9364170 ~ 9370779 (-)
AMCG00000279 atl1 coding upstream 64064 9427499 ~ 9439336 (-)
AMCG00000289 NA coding upstream 135285 9498720 ~ 9501150 (-)
AMCG00000290 NA coding upstream 188807 9552242 ~ 9553191 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 199960 9563395 ~ 9570360 (-)
G149132 NA non-coding downstream 415744 8882648 ~ 8945588 (-)
G149125 NA non-coding downstream 509553 8851316 ~ 8851779 (-)
G149087 NA non-coding downstream 616833 8743871 ~ 8744499 (-)
G149077 stxbp6 non-coding downstream 621348 8669016 ~ 8739984 (-)
G149068 NA non-coding downstream 777876 8529067 ~ 8583456 (-)
G149322 NA non-coding upstream 126834 9490269 ~ 9490806 (-)
G149324 NA non-coding upstream 130724 9494159 ~ 9496132 (-)
G149325 NA non-coding upstream 132798 9496233 ~ 9496585 (-)
G149326 LOC107379822 non-coding upstream 133412 9496847 ~ 9497214 (-)
G149332 NA non-coding upstream 146690 9510125 ~ 9511350 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 173066 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 315477 9026340 ~ 9045855 (-)
G149011 NA other downstream 1254493 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 1998640 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2798027 6556705 ~ 6563305 (-)
G149321 NA other upstream 124444 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 177176 9540611 ~ 9541259 (-)
G149395 NA other upstream 392946 9756381 ~ 9766794 (-)
G149402 NA other upstream 468320 9831755 ~ 9832133 (-)
G149441 NA other upstream 567535 9930970 ~ 9935550 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G41424 NA unknown CI01000006 null 2645662 ~ 2660570 (+)