G149325


Basic Information

Item Value
gene id G149325
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9496233 ~ 9496585 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187892
TGCCTTTGAGAGGGTGTCAGAGCAATTTCGACATTTCACCACCAGATGGcgacaaatacaaaattagaatgaacaaattaataaatcacagaTTCATTCAGTCTGGGCATTAAAAGCAGTTACACCTACTCAATATCCTGGCAAATCCGAAGTCACAGAGCTTAATGACCTGGTGTTTGGTGATCAGGATATTCTCTGGTTTCACATCCCTGTGAATGCACTGCAGAACAAGGAAACACAGGAGGGACAAACATCGGTACACATCACTCCAGTCCCCTCAACACCACGGTGCCTTACTTTCCCTATGACACGCTGACCTCGGCAGCTCATGGGGCACAAGTGTGAGCTCCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187892 True 353 lncRNA 0.46 1 9496233 9496585

Neighbor

gene id symbol gene type direction distance location
AMCG00000279 atl1 coding downstream 56897 9427499 ~ 9439336 (-)
AMCG00000276 NA coding downstream 125454 9364170 ~ 9370779 (-)
AMCG00000275 NA coding downstream 207021 9284358 ~ 9289212 (-)
AMCG00000272 frmd6,LOC102777289 coding downstream 285582 9194617 ~ 9210651 (-)
AMCG00000269 cunh14orf166,zgc:56576,LOC107725214,LOC107680004,LOC107693089,LOC107583671 coding downstream 330596 9157860 ~ 9165637 (-)
AMCG00000289 NA coding upstream 2135 9498720 ~ 9501150 (-)
AMCG00000290 NA coding upstream 55657 9552242 ~ 9553191 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 66810 9563395 ~ 9570360 (-)
AMCG00000284 ccdc177,LOC103144771,LOC106922444,LOC102219675,LOC102789726 coding upstream 267030 9763615 ~ 9765768 (-)
AMCG00000309 NA coding upstream 424734 9921319 ~ 9925304 (-)
G149324 NA non-coding downstream 101 9494159 ~ 9496132 (-)
G149322 NA non-coding downstream 5427 9490269 ~ 9490806 (-)
G149268 pygl,LOC104938237 non-coding downstream 132798 9361332 ~ 9363435 (-)
G149132 NA non-coding downstream 550645 8882648 ~ 8945588 (-)
G149125 NA non-coding downstream 644454 8851316 ~ 8851779 (-)
G149326 LOC107379822 non-coding upstream 262 9496847 ~ 9497214 (-)
G149332 NA non-coding upstream 13540 9510125 ~ 9511350 (-)
G149338 NA non-coding upstream 38129 9534714 ~ 9534919 (-)
G149339 NA non-coding upstream 39727 9536312 ~ 9536536 (-)
G149340 NA non-coding upstream 40244 9536829 ~ 9537094 (-)
G149321 NA other downstream 7624 9487879 ~ 9488609 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 307967 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 450378 9026340 ~ 9045855 (-)
G149011 NA other downstream 1389394 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 2133541 7361222 ~ 7362692 (-)
G149341 sos2 other upstream 44026 9540611 ~ 9541259 (-)
G149395 NA other upstream 259796 9756381 ~ 9766794 (-)
G149402 NA other upstream 335170 9831755 ~ 9832133 (-)
G149441 NA other upstream 434385 9930970 ~ 9935550 (-)
AMCG00000300 NA other upstream 533142 10029727 ~ 10059000 (-)

Expression


Co-expression Network