G149339


Basic Information

Item Value
gene id G149339
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9536312 ~ 9536536 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187908
aaaacaaaagaaaacacagaaaaaagcaGTACAGTTATTTGTGGTGGCCTCCTGTCTCAAGGAAGCAGGTGACAGCAGTACCTCAGCCAGGTCCTCGAAGCAGCTGCCCACCAGAGGGTGAGGACTGCCGTCCGCGGTCATCTCCACTGCGTCCTCGATCAGCCCCAGCAGCTTCACGGTCAGCTCGTGGATGTCCAGGATGTTGCTAAAGATCACTTCGATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187908 True 225 lncRNA 0.53 1 9536312 9536536

Neighbor

gene id symbol gene type direction distance location
AMCG00000289 NA coding downstream 35162 9498720 ~ 9501150 (-)
AMCG00000279 atl1 coding downstream 96976 9427499 ~ 9439336 (-)
AMCG00000276 NA coding downstream 165533 9364170 ~ 9370779 (-)
AMCG00000275 NA coding downstream 247100 9284358 ~ 9289212 (-)
AMCG00000272 frmd6,LOC102777289 coding downstream 325661 9194617 ~ 9210651 (-)
AMCG00000290 NA coding upstream 15706 9552242 ~ 9553191 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 26859 9563395 ~ 9570360 (-)
AMCG00000284 ccdc177,LOC103144771,LOC106922444,LOC102219675,LOC102789726 coding upstream 227079 9763615 ~ 9765768 (-)
AMCG00000309 NA coding upstream 384783 9921319 ~ 9925304 (-)
AMCG00000312 plekhd1 coding upstream 405889 9942425 ~ 9955020 (-)
G149338 NA non-coding downstream 1393 9534714 ~ 9534919 (-)
G149332 NA non-coding downstream 24962 9510125 ~ 9511350 (-)
G149326 LOC107379822 non-coding downstream 39098 9496847 ~ 9497214 (-)
G149325 NA non-coding downstream 39727 9496233 ~ 9496585 (-)
G149324 NA non-coding downstream 40180 9494159 ~ 9496132 (-)
G149340 NA non-coding upstream 293 9536829 ~ 9537094 (-)
G149343 sos2,LOC106611443 non-coding upstream 5976 9542512 ~ 9542776 (-)
G149344 NA non-coding upstream 7051 9543587 ~ 9544030 (-)
G149346 NA non-coding upstream 8131 9544667 ~ 9544914 (-)
G149367 NA non-coding upstream 35598 9572134 ~ 9574131 (-)
G149321 NA other downstream 47703 9487879 ~ 9488609 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 348046 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 490457 9026340 ~ 9045855 (-)
G149011 NA other downstream 1429473 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 2173620 7361222 ~ 7362692 (-)
G149341 sos2 other upstream 4075 9540611 ~ 9541259 (-)
G149395 NA other upstream 219845 9756381 ~ 9766794 (-)
G149402 NA other upstream 295219 9831755 ~ 9832133 (-)
G149441 NA other upstream 394434 9930970 ~ 9935550 (-)
AMCG00000300 NA other upstream 493191 10029727 ~ 10059000 (-)

Expression


Co-expression Network