G149395


Basic Information

Item Value
gene id G149395
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9756381 ~ 9766794 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU187980
ATTACTAAAGCCCAGTGTAGGTCATTTCACTTGCCAGGCTGACAGGACGTGTGCAGCTGCAGATCTGCGTCAGGGAGAGGGCGGACAGACGCGTCGAACTGGGACTGTTTctgagtctgtgtctgtgccaNNNGCTTATGTTCCCCAGTCGGAAATCTGGCATGTAAAGTCTGTAGCTTTCCATCCTTGCTAAAAGTCTGCAATAAAGTCAACCAAGTGCTTCTTTGAAATCAGTGATCGCAGGTGCACTTGGTGTCTGGAAGGACACACTGTGGCTGTGGGATATCAAACCACCTCCAATATGCAAAGAGTTTACAGAGAAAGCAAACCTCGATGGACAAGCCCCTTGGTGAAGCTCCCTAAGCCCTCTTCTCTTATCCCACTTTGAGAGAGCTGTTCACAAGTGTTTCACATttgaaagagaagagagagtaAGGGGGTTCCCAGATGATTCCCTCTGGTTGACATACTGCACCCAAACACCAGAGTGTTGGAGAGAGTCAAGACTCTGATTCTGCCACTGCTGGGCTGAAGAGTCTCAACGCACAACTCATGGAGACCCCAAGATGTAGTCTGCAGACTTTGGGGTTGGCAGCCACGTCTGGGGAATGCCTTCTTCAGCCAGTGACATTCGACTGCAGGCCTTTTTCCCCTGTTAATATCAAATTATTatctcagttgtttttttttctattcccaTTGTGTAAACCCAGCTCTTATATCTGCATGTCTTTTctatctgaatacattttgtacttCCATAAGCAAGGCTTGCCGCATGTTCTGTTCCATTCAGGTTTTCTCCATTCTCCATCTGCAACAATGAATGTACAAAAGGCTGCAAAAACTAGTTCTCCCATGAGATACTATGCAGTCCAAATCATGGAGCTAAAGGGACCACTTCTTTGTCTATTTTTGCTGTCATCCGCCTAGAGGATCAAGACAGTTATGTTTTGCAGGATCTTCCTTCCATAGATATCGGTAATATGGATACACCTCAACAATGCCAATGTAAGAATCCGTGCagataacaaataaaacattgttttattttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187980 True 1056 TUCP 0.45 4 9756381 9766794

Neighbor

gene id symbol gene type direction distance location
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding downstream 186021 9563395 ~ 9570360 (-)
AMCG00000290 NA coding downstream 203190 9552242 ~ 9553191 (-)
AMCG00000289 NA coding downstream 255231 9498720 ~ 9501150 (-)
AMCG00000279 atl1 coding downstream 317045 9427499 ~ 9439336 (-)
AMCG00000276 NA coding downstream 385602 9364170 ~ 9370779 (-)
AMCG00000309 NA coding upstream 154525 9921319 ~ 9925304 (-)
AMCG00000312 plekhd1 coding upstream 175631 9942425 ~ 9955020 (-)
AMCG00000308 LOC101074829,LOC107664419 coding upstream 194100 9960894 ~ 9970582 (-)
AMCG00000310 rbm25,LOC103353665 coding upstream 206193 9972987 ~ 9997466 (-)
AMCG00000311 NA coding upstream 243342 10010136 ~ 10021096 (-)
G149391 NA non-coding downstream 9275 9744764 ~ 9747106 (-)
G149367 NA non-coding downstream 182250 9572134 ~ 9574131 (-)
G149346 NA non-coding downstream 211467 9544667 ~ 9544914 (-)
G149344 NA non-coding downstream 212351 9543587 ~ 9544030 (-)
G149343 sos2,LOC106611443 non-coding downstream 213605 9542512 ~ 9542776 (-)
G149414 NA non-coding upstream 127752 9894546 ~ 9897750 (-)
G149438 NA non-coding upstream 153118 9919912 ~ 9921022 (-)
G149532 NA non-coding upstream 827932 10594726 ~ 10594935 (-)
G149539 NA non-coding upstream 945683 10712477 ~ 10712681 (-)
G149567 NA non-coding upstream 1366607 11133401 ~ 11134191 (-)
G149341 sos2 other downstream 215122 9540611 ~ 9541259 (-)
G149321 NA other downstream 267772 9487879 ~ 9488609 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 568115 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 710526 9026340 ~ 9045855 (-)
G149011 NA other downstream 1649542 8095965 ~ 8106839 (-)
G149402 NA other upstream 64961 9831755 ~ 9832133 (-)
G149441 NA other upstream 164176 9930970 ~ 9935550 (-)
AMCG00000300 NA other upstream 262933 10029727 ~ 10059000 (-)
AMCG00000334 NA other upstream 2020295 11787089 ~ 11808825 (-)
AMCG00000336 NA other upstream 2073686 11840480 ~ 11847948 (-)

Expression


Co-expression Network