Gene
RNA
| Item | Value |
|---|---|
| gene id | G149438 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9919912 ~ 9921022 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188048 | True | 1086 | lncRNA | 0.44 | 2 | 9919912 | 9921022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000284 | ccdc177,LOC103144771,LOC106922444,LOC102219675,LOC102789726 | coding | downstream | 154144 | 9763615 ~ 9765768 (-) |
| AMCG00000291 | cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 | coding | downstream | 349552 | 9563395 ~ 9570360 (-) |
| AMCG00000290 | NA | coding | downstream | 366721 | 9552242 ~ 9553191 (-) |
| AMCG00000289 | NA | coding | downstream | 418762 | 9498720 ~ 9501150 (-) |
| AMCG00000279 | atl1 | coding | downstream | 480576 | 9427499 ~ 9439336 (-) |
| AMCG00000309 | NA | coding | upstream | 297 | 9921319 ~ 9925304 (-) |
| AMCG00000312 | plekhd1 | coding | upstream | 21403 | 9942425 ~ 9955020 (-) |
| AMCG00000308 | LOC101074829,LOC107664419 | coding | upstream | 39872 | 9960894 ~ 9970582 (-) |
| AMCG00000310 | rbm25,LOC103353665 | coding | upstream | 51965 | 9972987 ~ 9997466 (-) |
| AMCG00000311 | NA | coding | upstream | 89114 | 10010136 ~ 10021096 (-) |
| G149414 | NA | non-coding | downstream | 22162 | 9894546 ~ 9897750 (-) |
| G149391 | NA | non-coding | downstream | 172806 | 9744764 ~ 9747106 (-) |
| G149367 | NA | non-coding | downstream | 345781 | 9572134 ~ 9574131 (-) |
| G149346 | NA | non-coding | downstream | 374998 | 9544667 ~ 9544914 (-) |
| G149344 | NA | non-coding | downstream | 375882 | 9543587 ~ 9544030 (-) |
| G149532 | NA | non-coding | upstream | 673704 | 10594726 ~ 10594935 (-) |
| G149539 | NA | non-coding | upstream | 791455 | 10712477 ~ 10712681 (-) |
| G149567 | NA | non-coding | upstream | 1212379 | 11133401 ~ 11134191 (-) |
| G149573 | NA | non-coding | upstream | 1254659 | 11175681 ~ 11176066 (-) |
| G149596 | NA | non-coding | upstream | 1417369 | 11338391 ~ 11368231 (-) |
| G149402 | NA | other | downstream | 87779 | 9831755 ~ 9832133 (-) |
| G149395 | NA | other | downstream | 153118 | 9756381 ~ 9766794 (-) |
| G149341 | sos2 | other | downstream | 378653 | 9540611 ~ 9541259 (-) |
| G149321 | NA | other | downstream | 431303 | 9487879 ~ 9488609 (-) |
| AMCG00000270 | gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 | other | downstream | 731646 | 9170083 ~ 9188266 (-) |
| G149441 | NA | other | upstream | 9948 | 9930970 ~ 9935550 (-) |
| AMCG00000300 | NA | other | upstream | 108705 | 10029727 ~ 10059000 (-) |
| AMCG00000334 | NA | other | upstream | 1866067 | 11787089 ~ 11808825 (-) |
| AMCG00000336 | NA | other | upstream | 1919458 | 11840480 ~ 11847948 (-) |
| G149751 | NA | other | upstream | 2160521 | 12081543 ~ 12083214 (-) |
