Gene
RNA
| Item | Value |
|---|---|
| gene id | G149539 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10712477 ~ 10712681 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188180 | True | 205 | lncRNA | 0.37 | 1 | 10712477 | 10712681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000295 | LOC108443923,LOC108270253 | coding | downstream | 419005 | 10278809 ~ 10293472 (-) |
| AMCG00000296 | gphna,LOC107752769,LOC107657705 | coding | downstream | 503249 | 10161709 ~ 10209228 (-) |
| AMCG00000299 | NA | coding | downstream | 584521 | 10125262 ~ 10127956 (-) |
| AMCG00000301 | mpp5,LOC107657730,LOC107752770,LOC105026062,LOC107592802,LOC106611266 | coding | downstream | 597667 | 10104501 ~ 10114810 (-) |
| AMCG00000298 | eif2s1,eif2s1b | coding | downstream | 621659 | 10083307 ~ 10090818 (-) |
| AMCG00000316 | LOC106571665 | coding | upstream | 67429 | 10780110 ~ 10783723 (-) |
| AMCG00000317 | LOC107733188,LOC106611223,LOC106602554,LOC108433921,LOC108270174 | coding | upstream | 102303 | 10814984 ~ 10826988 (-) |
| AMCG00000318 | NA | coding | upstream | 146074 | 10858755 ~ 10861525 (-) |
| AMCG00000319 | NA | coding | upstream | 494768 | 11207449 ~ 11210136 (-) |
| AMCG00000320 | NA | coding | upstream | 508239 | 11220920 ~ 11221514 (-) |
| G149532 | NA | non-coding | downstream | 117542 | 10594726 ~ 10594935 (-) |
| G149438 | NA | non-coding | downstream | 791455 | 9919912 ~ 9921022 (-) |
| G149414 | NA | non-coding | downstream | 814727 | 9894546 ~ 9897750 (-) |
| G149391 | NA | non-coding | downstream | 965371 | 9744764 ~ 9747106 (-) |
| G149367 | NA | non-coding | downstream | 1138346 | 9572134 ~ 9574131 (-) |
| G149567 | NA | non-coding | upstream | 420720 | 11133401 ~ 11134191 (-) |
| G149573 | NA | non-coding | upstream | 463000 | 11175681 ~ 11176066 (-) |
| G149596 | NA | non-coding | upstream | 625710 | 11338391 ~ 11368231 (-) |
| G149603 | NA | non-coding | upstream | 724686 | 11437367 ~ 11437819 (-) |
| G149616 | NA | non-coding | upstream | 814189 | 11526870 ~ 11527092 (-) |
| AMCG00000300 | NA | other | downstream | 653477 | 10029727 ~ 10059000 (-) |
| G149441 | NA | other | downstream | 776927 | 9930970 ~ 9935550 (-) |
| G149402 | NA | other | downstream | 880344 | 9831755 ~ 9832133 (-) |
| G149395 | NA | other | downstream | 945683 | 9756381 ~ 9766794 (-) |
| G149341 | sos2 | other | downstream | 1171218 | 9540611 ~ 9541259 (-) |
| AMCG00000334 | NA | other | upstream | 1074408 | 11787089 ~ 11808825 (-) |
| AMCG00000336 | NA | other | upstream | 1127799 | 11840480 ~ 11847948 (-) |
| G149751 | NA | other | upstream | 1368862 | 12081543 ~ 12083214 (-) |
| G149847 | NA | other | upstream | 1809839 | 12522520 ~ 12542310 (-) |
| G150138 | NA | other | upstream | 3111273 | 13823954 ~ 13826709 (-) |
