Gene
RNA
| Item | Value |
|---|---|
| gene id | G149802 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12345409 ~ 12345710 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188521 | True | 302 | lncRNA | 0.55 | 1 | 12345409 | 12345710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000343 | NA | coding | downstream | 163947 | 12173635 ~ 12181462 (-) |
| AMCG00000341 | NA | coding | downstream | 183842 | 12159466 ~ 12161567 (-) |
| AMCG00000342 | NA | coding | downstream | 200759 | 12143523 ~ 12144650 (-) |
| AMCG00000356 | NA | coding | downstream | 319913 | 12024594 ~ 12025496 (-) |
| AMCG00000355 | NA | coding | downstream | 326228 | 12005106 ~ 12019181 (-) |
| AMCG00000348 | degs2,LOC107697737,LOC107733197 | coding | upstream | 20755 | 12366465 ~ 12379163 (-) |
| AMCG00000360 | slc25a29,LOC101165114 | coding | upstream | 58894 | 12404604 ~ 12414806 (-) |
| AMCG00000361 | wars,LOC107088075,LOC103399041 | coding | upstream | 77293 | 12423003 ~ 12428292 (-) |
| AMCG00000362 | NA | coding | upstream | 114920 | 12460630 ~ 12471493 (-) |
| AMCG00000364 | NA | coding | upstream | 143473 | 12489183 ~ 12517199 (-) |
| G149801 | NA | non-coding | downstream | 41066 | 12304000 ~ 12304343 (-) |
| G149763 | NA | non-coding | downstream | 186938 | 12157749 ~ 12158471 (-) |
| G149756 | NA | non-coding | downstream | 246918 | 12090647 ~ 12098491 (-) |
| G149755 | NA | non-coding | downstream | 255143 | 12090007 ~ 12090266 (-) |
| G149754 | NA | non-coding | downstream | 257439 | 12087596 ~ 12087970 (-) |
| G149942 | dync1h1,LOC107568493 | non-coding | upstream | 472070 | 12817780 ~ 12825281 (-) |
| G149994 | NA | non-coding | upstream | 596876 | 12942586 ~ 12946121 (-) |
| G149995 | NA | non-coding | upstream | 601606 | 12947316 ~ 12949350 (-) |
| G149996 | NA | non-coding | upstream | 604215 | 12949925 ~ 12950128 (-) |
| G150007 | NA | non-coding | upstream | 621250 | 12966960 ~ 12968715 (-) |
| G149751 | NA | other | downstream | 262195 | 12081543 ~ 12083214 (-) |
| AMCG00000336 | NA | other | downstream | 497461 | 11840480 ~ 11847948 (-) |
| AMCG00000334 | NA | other | downstream | 536584 | 11787089 ~ 11808825 (-) |
| AMCG00000300 | NA | other | downstream | 2286409 | 10029727 ~ 10059000 (-) |
| G149441 | NA | other | downstream | 2409859 | 9930970 ~ 9935550 (-) |
| G149847 | NA | other | upstream | 176810 | 12522520 ~ 12542310 (-) |
| G150138 | NA | other | upstream | 1478244 | 13823954 ~ 13826709 (-) |
| AMCG00000409 | exoc5 | other | upstream | 1657366 | 14003076 ~ 14028927 (-) |
| AMCG00000425 | entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 | other | upstream | 1900107 | 14245817 ~ 14261332 (-) |
| AMCG00000436 | NA | other | upstream | 2224252 | 14569962 ~ 14572432 (-) |
