Gene
RNA
| Item | Value |
|---|---|
| gene id | G149996 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12949925 ~ 12950128 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188770 | True | 204 | lncRNA | 0.36 | 1 | 12949925 | 12950128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000372 | pole2 | coding | downstream | 17736 | 12921383 ~ 12932189 (-) |
| AMCG00000373 | NA | coding | downstream | 29968 | 12912172 ~ 12919957 (-) |
| AMCG00000374 | NA | coding | downstream | 53475 | 12885744 ~ 12896450 (-) |
| AMCG00000379 | LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 | coding | downstream | 102704 | 12833200 ~ 12847221 (-) |
| AMCG00000378 | NA | coding | downstream | 119775 | 12826593 ~ 12830150 (-) |
| AMCG00000375 | NA | coding | upstream | 747 | 12950875 ~ 12952176 (-) |
| AMCG00000371 | NA | coding | upstream | 4858 | 12954986 ~ 12964206 (-) |
| AMCG00000382 | NA | coding | upstream | 187658 | 13137786 ~ 13146523 (-) |
| AMCG00000383 | NA | coding | upstream | 196402 | 13146530 ~ 13226435 (-) |
| AMCG00000389 | NA | coding | upstream | 654001 | 13604129 ~ 13607997 (-) |
| G149995 | NA | non-coding | downstream | 575 | 12947316 ~ 12949350 (-) |
| G149994 | NA | non-coding | downstream | 3804 | 12942586 ~ 12946121 (-) |
| G149942 | dync1h1,LOC107568493 | non-coding | downstream | 124644 | 12817780 ~ 12825281 (-) |
| G149802 | NA | non-coding | downstream | 604215 | 12345409 ~ 12345710 (-) |
| G149801 | NA | non-coding | downstream | 645582 | 12304000 ~ 12304343 (-) |
| G150007 | NA | non-coding | upstream | 16832 | 12966960 ~ 12968715 (-) |
| G150072 | NA | non-coding | upstream | 649706 | 13599834 ~ 13682131 (-) |
| G150083 | LOC100846954,LOC107575789 | non-coding | upstream | 699265 | 13649393 ~ 13650005 (-) |
| G150084 | NA | non-coding | upstream | 717434 | 13667562 ~ 13668139 (-) |
| G150086 | NA | non-coding | upstream | 737643 | 13687771 ~ 13688177 (-) |
| G149847 | NA | other | downstream | 407615 | 12522520 ~ 12542310 (-) |
| G149751 | NA | other | downstream | 866711 | 12081543 ~ 12083214 (-) |
| AMCG00000336 | NA | other | downstream | 1101977 | 11840480 ~ 11847948 (-) |
| AMCG00000334 | NA | other | downstream | 1141100 | 11787089 ~ 11808825 (-) |
| AMCG00000300 | NA | other | downstream | 2890925 | 10029727 ~ 10059000 (-) |
| G150138 | NA | other | upstream | 873826 | 13823954 ~ 13826709 (-) |
| AMCG00000409 | exoc5 | other | upstream | 1052948 | 14003076 ~ 14028927 (-) |
| AMCG00000425 | entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 | other | upstream | 1295689 | 14245817 ~ 14261332 (-) |
| AMCG00000436 | NA | other | upstream | 1619834 | 14569962 ~ 14572432 (-) |
| AMCG00000457 | NA | other | upstream | 2173897 | 15124025 ~ 15137923 (-) |
