G150084


Basic Information

Item Value
gene id G150084
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 13667562 ~ 13668139 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU188880
CCCCTGGGCACATCCACTTGATGCCCCCTGCCCACGTCCTGCCAGTAGTGCAGCAGCCtgtcctgctcctcctcctccatggGCTCGGCTTCGTCCTCCAGGGAGATCATCCCCAGGCGCGATTCCGATTCCGTCCCGCCGCCCTGCCCCCCACCGCCATTTAACCGACAGCCTCCCCTATCCATGGCCTGGGAACCGGTGTGTGAATGGATATGATCAATGCACCCGGATCTCAAGGCGGACTATTGCTATGTTCAGATCAAGGCTGCAGCGGTTTGTTTCCACACTTGTCTCTCTTGCAACTGCAGCTAAACTAACAAAATAAGACAAACTTTCAGCCTTTTAGTTTACTGATCATGTCTGGCACCCTGGCGTTTCTGCCTGGATTGATTGTATTGATGCACAGTGATAAATGCGCAGAGAGGAAAACGAACAGGCTGATGCCCACCGACTGCCCACCTCCCGCCCGTAAAGACGGCAGCCCTGCTACGGGTGACAGTGCAGCTCCTCCA

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU188880 True 512 lncRNA 0.56 2 13667562 13668139

Neighbor

gene id symbol gene type direction distance location
AMCG00000390 NA coding downstream 15427 13626383 ~ 13652135 (-)
AMCG00000389 NA coding downstream 59565 13604129 ~ 13607997 (-)
AMCG00000383 NA coding downstream 441127 13146530 ~ 13226435 (-)
AMCG00000382 NA coding downstream 521039 13137786 ~ 13146523 (-)
AMCG00000371 NA coding downstream 703356 12954986 ~ 12964206 (-)
AMCG00000391 NA coding upstream 15888 13684027 ~ 13687008 (-)
AMCG00000400 NA coding upstream 23790 13691929 ~ 13693526 (-)
AMCG00000399 NA coding upstream 26539 13694678 ~ 13701429 (-)
AMCG00000398 NA coding upstream 39644 13707783 ~ 13729942 (-)
AMCG00000397 clg15h14orf28,LOC106581668,LOC106610876 coding upstream 78040 13746179 ~ 13752105 (-)
G150083 LOC100846954,LOC107575789 non-coding downstream 17557 13649393 ~ 13650005 (-)
G150007 NA non-coding downstream 698847 12966960 ~ 12968715 (-)
G149996 NA non-coding downstream 717434 12949925 ~ 12950128 (-)
G149995 NA non-coding downstream 718212 12947316 ~ 12949350 (-)
G149994 NA non-coding downstream 721441 12942586 ~ 12946121 (-)
G150086 NA non-coding upstream 19632 13687771 ~ 13688177 (-)
G150115 NA non-coding upstream 71657 13739796 ~ 13746130 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding upstream 88377 13756516 ~ 13761597 (-)
G150219 NA non-coding upstream 483449 14151588 ~ 14153846 (-)
G150306 NA non-coding upstream 827320 14495459 ~ 14495660 (-)
G149847 NA other downstream 1125252 12522520 ~ 12542310 (-)
G149751 NA other downstream 1584348 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 1819614 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1858737 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 3608562 10029727 ~ 10059000 (-)
G150138 NA other upstream 155815 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 334937 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 577678 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 901823 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 1455886 15124025 ~ 15137923 (-)

Expression


Co-expression Network