G150427


Basic Information

Item Value
gene id G150427
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14890534 ~ 14891706 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189312
GGGAGTGTCTGAGCGGCACACAATGTAGCCGGCATGAGCTCACTGTGCATTCACCCGATACAATGGATCTCAGGACTGGGAAATAAACGAGGAGATTTCCGGGAAGAAAAAAGCATGCTGTGAAAAGGCATGCATGGACCACGGTGGGCTGTCAACGGCGATGAAGTCCAGGGACCAGGGATTGTGCAAGGCCGATTGTGCAGTTTTGCGAGGCGGTGTGGACGTGGGTTGGATGACCTCTGGTATAAATGTAACTGATCTCCACTAGATTCATGTCTGGATGCTGAATTAAGGCGTTTTTCTTCTCGCTTGTCGGAGTACAGTTACTACTGAGATGATACACATGTGTTACTTACAGTTGGGTTTGTAGATTGCTGTACTACACGGTGCTATATTATTAAACCACAAACTGTTGTgttcaatgtatatttaatacacTGATAGAGCTGCAACACCACACTGTCTTAGGTTTCTGAACCGtttctcaattattattattttttaatcatattgcGCTTCAAAGATGCATGTCTGAGCCGTGAGACTAATGATTTTAATGGGAACCcgattatttttatatattattttatagttataCCATTGCATTGTCTCTGGGCGAAGGTGAAGTCTTTTAGATAGCAACATATTTGTTGATATCATTACCTACTTTTGCTAAGTATGTCTTGGGATgcctttctttaaaacaaataagagtTATATTTTATAGTGTATTTAAGTTCACACGTTTTCCTTGcagtgtaatattttttttctttgttttttgaaagaaaacaaacaccattATTGCTTAAAAACGCATCAAGATGAATGTTGCAAACTAGTGAATGATAGATCACAACAGGAAAAACCTTTTGAAGTAAGATGCCTTGTCCTGTTGAATATAAACCCAGTATATCTGTCACATATTGACATACATGTTGCAACATGTCACTATGTAATACTGTGCACTTCAGAGATTGTGCCATTTGTGTTCCATAGTGGATGTCCTTCTCTGCTTTCTTATCATTTGTGGGTTAGTTGTGATGTTGATTGGGCCCATTTACTTGCAAAGGGCCACTACATTCATTGTGCCATGAGCTGTATGGCATTGCTGtatagttgtgtgttttgtggaaATTGTCACTGCTGAGAGTTTGAGGCGGTCGAGTTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189312 True 1173 lncRNA 0.39 1 14890534 14891706

Neighbor

gene id symbol gene type direction distance location
AMCG00000444 vash1,LOC106589786 coding downstream 4 14881250 ~ 14890530 (-)
AMCG00000453 NA coding downstream 21877 14862756 ~ 14868657 (-)
AMCG00000455 NA coding downstream 29710 14860339 ~ 14860824 (-)
AMCG00000454 NA coding downstream 31546 14839239 ~ 14858988 (-)
AMCG00000451 NA coding downstream 65925 14822861 ~ 14824609 (-)
AMCG00000445 esrrb coding upstream 48039 14939745 ~ 14943179 (-)
AMCG00000446 esrrb coding upstream 62962 14954668 ~ 14976422 (-)
AMCG00000442 NA coding upstream 150434 15042140 ~ 15065371 (-)
AMCG00000459 ift43,LOC106590872 coding upstream 200436 15092142 ~ 15108451 (-)
AMCG00000458 ttll5 coding upstream 249690 15141396 ~ 15180517 (-)
G150306 NA non-coding downstream 394874 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 736688 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 1128937 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 1144404 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 1202357 13687771 ~ 13688177 (-)
G150476 NA non-coding upstream 337191 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 358919 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 369681 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 379690 15271396 ~ 15273123 (-)
G150497 NA non-coding upstream 384257 15275963 ~ 15278056 (-)
AMCG00000436 NA other downstream 318102 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 629202 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 861607 14003076 ~ 14028927 (-)
G150138 NA other downstream 1063825 13823954 ~ 13826709 (-)
G149847 NA other downstream 2348224 12522520 ~ 12542310 (-)
AMCG00000457 NA other upstream 232319 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 321696 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 397597 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 570140 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 606466 15498172 ~ 15527390 (-)

Expression


Co-expression Network