G150497


Basic Information

Item Value
gene id G150497
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15275963 ~ 15278056 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189401
TATCATTTCACAGTATAATGGTTTTATTGTGGTGAAAATTACAAGGTCTGTAGCTCAGAGGGGATACTGAGAAATTGTTTTTACctttaaaagaaattaaataacttcaGACATTCCCAAGATAATGTTGAACAATCTCAAACATCACTTGTTATTCAATAAATGAGAGCATCCAATGCTTTCATACTGAGACAGGCTAATTAAAttctacagaaatgtattttgtctaGCCTTTTTATTGAACTCTGGTGAGAAATAATACCCAAACTAAAGTAAAAACCTATTGTGAATTATATGAACTgcaataaatatgttaaaagaacaatacggtacatttttattcaagacaaaaagaaaatcctttcatgtttggttttatattttttttatttaaaacagtcaaaacaaattaatccgTTAACCACAGTGGAAATAGTTTTATTCACTGTTTAAAATCTTCAGAATTACCCATAAGACCAAATTTCGATAgccaagagaaaaagaaaaagaaaaactctgcCCAAGAAAAAAAGTTACCGATTTGATGCAGAACACCACAAGCATCCAGTATTTGTGAATCTGAAATTTGTATTAACATTACCATTTCAAACTAGGATTTTGAAAAGTGGGAGAGCAGTTACTGTAACTAATGAAGTGTTGCCTTCCATTTgtaaaaattacacaattaagcAGGATACATTTCCAAACAACCTGATTAACTACTTCTGAATGAGCAGACTATAAAAGTATTAAACCttatgtacaattattttgaaaacaccAATAAAAGTAACAACTAACTAAATAAAGGTCATTCAAAATGTTCTTAGAGCTTCTGAAGATTGATTTATTGGAAATCAACCATTACACCCAACTTAAAGTCTATATTTGAAAGTACATTCTTCTGGTTTATGTTGAATAAAAATGACCAAATGAGTAGATATTGTTGTATGTAAACTCTTACTAACATTTCTGTTGTGGACTTGCTTATGGTATTAAAAGAAATCCAGAAAGTGGAAGAAATCCAAAGCATTTGATACAAAAAGGGCCACTGCGGTTAATGATAAATTATGTAACTTATATCCTCAGAATGACCGAGTAGAAAACCCAGGGTCACTGCTTTCTGGATTCACAGGACGTTCTTTTTAATGGacactttatatttttgattaaaaacaaaacaagtacatGTAATAAGGGGATGGAGTCTGAACTTCAAAAGATGAAAATGACTTTGAAGATAAGTTCAAATGAGTTTCTGATAAATTACTAAATCCAGAAGTCTGTCTTCTTTCAGTTGCAGaatttctgaaaacaatatttacaaaaataaaaatacggTGTCAGAAATGATGCTATTTTGTGACACTGACTTGACAAGTTGAGGgtgaaaaaaagtatttcagtgGTAAGTATAATCCTTGTCAGAATGACCACAACAAACCAGCGGCTTTAGAATCCCTTCAATTAACTCCCCAGTACTAGATTTAATTCACCAGATCATCTCGTTGGTGGCCGGCAATGCCACCTGTTCTGCAGTTTTCAGctcaaattcatgtttttactcGATGAGTTTCTTTGCCTTGAAGAAGCGGCGCAGGTAGAAGACCTGCCATGTGGCCAGACCGATCAGGCAGCACATGGAGAAGATGCTGAAGTACAGGACACGGGTGTTCGTGGACCATTGGTGTCCCTCATCTCCTCTTCTCGTTTCTTCATGTACGCAAAGTCATTAACGATGGACTCGGACAGGTCCTCCAGTCGCCGGAGTTCCACTTCCAAAGGCTTCAGTTTCTCCACCTTGGCAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189401 True 1810 lncRNA 0.34 2 15275963 15278056

Neighbor

gene id symbol gene type direction distance location
AMCG00000467 NA coding downstream 20134 15253292 ~ 15255829 (-)
AMCG00000463 atf3,jdp2,LOC106611045 coding downstream 33810 15230288 ~ 15242153 (-)
AMCG00000466 flvcr2,LOC108242486 coding downstream 64092 15187199 ~ 15211871 (-)
AMCG00000458 ttll5 coding downstream 95446 15141396 ~ 15180517 (-)
AMCG00000459 ift43,LOC106590872 coding downstream 167512 15092142 ~ 15108451 (-)
AMCG00000465 NA coding upstream 1433 15279489 ~ 15288455 (-)
AMCG00000476 NA coding upstream 19821 15297877 ~ 15309522 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding upstream 32945 15311001 ~ 15320215 (-)
AMCG00000480 NA coding upstream 105601 15383657 ~ 15390950 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding upstream 113813 15391869 ~ 15411274 (-)
G150504 NA non-coding downstream 2840 15271396 ~ 15273123 (-)
G150502 NA non-coding downstream 12387 15261387 ~ 15263576 (-)
G150485 NA non-coding downstream 25134 15250625 ~ 15250829 (-)
G150476 NA non-coding downstream 46671 15228897 ~ 15229292 (-)
G150427 NA non-coding downstream 384257 14890534 ~ 14891706 (-)
G150514 NA non-coding upstream 16163 15294219 ~ 15295205 (-)
G150581 NA non-coding upstream 288703 15566759 ~ 15568750 (-)
G150586 NA non-coding upstream 300833 15578889 ~ 15580921 (-)
G150588 NA non-coding upstream 341165 15619221 ~ 15619788 (-)
G150626 NA non-coding upstream 478797 15756853 ~ 15758160 (-)
AMCG00000464 batf other downstream 53220 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 138040 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 703531 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 1014631 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 1247036 14003076 ~ 14028927 (-)
AMCG00000475 NA other upstream 11247 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 183790 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 220116 15498172 ~ 15527390 (-)
G150729 NA other upstream 1527139 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1555703 16833759 ~ 16836603 (-)

Expression


Co-expression Network