G150588


Basic Information

Item Value
gene id G150588
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15619221 ~ 15619788 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189515
GTGGATATTTTTCTGCCTGTTTGAAGATTGATGACGGAACGGGCGCATCCGACACCGCCGTGCAAACAGGGCTGGCTGTGGGAGGAACATCGCACGCCGAGCCGCCGGCCCTTGAGCGCTCACGCCTAAGCTTCCTCCCTTTGCTCTGTGCAGTCCATGTGCGCcccaaggacacacacacaccggggGCGACTGCAGGACTGCAACGGGGAACCGTGGAGAAAGCATGGAGTCCACAACGACAACCACAGCCAAAACAATGCAGGCGATTTTATAGATGCATGCATTGggcaaacaaacatgcatatacaacctattttaatgtataagcAAGTACGTCTAGAATTATGGTGTATCCAGTAAAACACAACATCTATTCAACTGAATTCTAGGACATGAATCCACGCGTTAATAGCAAATCATGCTTACCTGGACGATATGTGCATTAGAAACGGCAACcaacttcattttaaatactgctGACTCAAGATACTTCCTGGAGTTTACCCGGAAGTACTTCCCCAGTAACTTTTATcctgatgtattttttgttttcttcatttgcaGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189515 True 568 lncRNA 0.47 1 15619221 15619788

Neighbor

gene id symbol gene type direction distance location
AMCG00000472 NA coding downstream 192 15616963 ~ 15619029 (-)
AMCG00000481 NA coding downstream 199651 15415530 ~ 15419570 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 207947 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 228271 15383657 ~ 15390950 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding downstream 299006 15311001 ~ 15320215 (-)
AMCG00000494 NA coding upstream 633349 16253137 ~ 16266313 (-)
AMCG00000493 NA coding upstream 657210 16276998 ~ 16278955 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 1030283 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 1067317 16687105 ~ 16689646 (-)
AMCG00000496 setd3,LOC100195551 coding upstream 1102386 16722174 ~ 16736751 (-)
G150586 NA non-coding downstream 38300 15578889 ~ 15580921 (-)
G150581 NA non-coding downstream 50471 15566759 ~ 15568750 (-)
G150514 NA non-coding downstream 324016 15294219 ~ 15295205 (-)
G150497 NA non-coding downstream 341165 15275963 ~ 15278056 (-)
G150504 NA non-coding downstream 346098 15271396 ~ 15273123 (-)
G150626 NA non-coding upstream 137065 15756853 ~ 15758160 (-)
G150634 NA non-coding upstream 228247 15848035 ~ 15871468 (-)
G150661 NA non-coding upstream 613170 16232958 ~ 16233189 (-)
G150731 NA non-coding upstream 1203241 16823029 ~ 16840596 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 2144802 17764590 ~ 17765401 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 91831 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 140172 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 327966 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 396478 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 481298 15124025 ~ 15137923 (-)
G150729 NA other upstream 1185407 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1213971 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 1933930 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 2065777 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 2256581 17876369 ~ 17878350 (-)

Expression


Co-expression Network