G150661


Basic Information

Item Value
gene id G150661
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16232958 ~ 16233189 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189602
TGGCTAGTGAGGTATTGTatacagaataattaaaaagcaaaattacCACTTCCACAAGTGATGAACTGACGTGATAAACTTACTTTTGACTTGCTTGTTTTTTAGGATAACAATTAGTCAGTTTAACTCTTTAACAGTCCAGTAATCAATGGTGACACTTTATAAAGACACTAGTTTTAATTCTTCTTTTCAGCTAGTGCTCCCTGTATTATCACAGATATTATGAGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189602 True 232 lncRNA 0.32 1 16232958 16233189

Neighbor

gene id symbol gene type direction distance location
AMCG00000472 NA coding downstream 613929 15616963 ~ 15619029 (-)
AMCG00000481 NA coding downstream 813388 15415530 ~ 15419570 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 821684 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 842008 15383657 ~ 15390950 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding downstream 912743 15311001 ~ 15320215 (-)
AMCG00000494 NA coding upstream 19948 16253137 ~ 16266313 (-)
AMCG00000493 NA coding upstream 43809 16276998 ~ 16278955 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 416882 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 453916 16687105 ~ 16689646 (-)
AMCG00000496 setd3,LOC100195551 coding upstream 488985 16722174 ~ 16736751 (-)
G150634 NA non-coding downstream 361490 15848035 ~ 15871468 (-)
G150626 NA non-coding downstream 474798 15756853 ~ 15758160 (-)
G150588 NA non-coding downstream 613170 15619221 ~ 15619788 (-)
G150586 NA non-coding downstream 652037 15578889 ~ 15580921 (-)
G150581 NA non-coding downstream 664208 15566759 ~ 15568750 (-)
G150731 NA non-coding upstream 589840 16823029 ~ 16840596 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding upstream 1531401 17764590 ~ 17765401 (-)
G150853 NA non-coding upstream 1532758 17765947 ~ 17766735 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding upstream 1546039 17779228 ~ 17800956 (-)
G150965 NA non-coding upstream 1866389 18099578 ~ 18100896 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other downstream 705568 15498172 ~ 15527390 (-)
AMCG00000482 NA other downstream 753909 15461846 ~ 15479049 (-)
AMCG00000475 NA other downstream 941703 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 1010215 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 1095035 15124025 ~ 15137923 (-)
G150729 NA other upstream 572006 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 600570 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 1320529 17553718 ~ 17578383 (-)
AMCG00000529 NA other upstream 1452376 17685565 ~ 17719171 (-)
AMCG00000521 NA other upstream 1643180 17876369 ~ 17878350 (-)

Expression


Co-expression Network