G151087


Basic Information

Item Value
gene id G151087
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 18411488 ~ 18412525 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190177
GTCCTGTAGTACCATTAACACTTCAGTAATAGTTAGTTTTACGCAGTGAGTAGTGAGAGAGGACGCTAATCGTTTTTTGCACCGTTGGTCTCTTGGTGGACTTCAGTGAACCGCCCTGTGAAAGTTACACACCCACCCACGGCCTGTACAACTTGAGCCGTCCGGACTACCACAACACACTCTTACTGCTGTCAATCTCCGAAAAAATTAAACGCGAAGCTTGATATATAAACGTGTTGTTTCATATCATTGGACAAACACAAGACGGCTTTTGATGGTTAAATGTGATCCTTCTGTTCGGTTGGTTTTGGTCCGTTTCAGGGCAGGTTAACGGCTCATCCGAGTCCGTTATTAACCGTTAACTGATGCTGTAATGGAGAAGCTCCCGTTGgctgcagtttgtgtttgtttgcagacAAAACCCTGTCGATCATGCAAAGCAAATCTCTGCGCCCGGTCTCTCGCAGGCAGGCAGGTAGGCAGGCTGCACCTCTGCCTGGTTTCTAAGGGTGAACGTCAACAAACCAGCCGGAGCACAATAACacaacaccccccacacacagccaATGCCACCTGCAGCTAGCCAGTGAGAGAGCAAAGAAACTAAGTGCGGCTACATCCGACTTCCTCCAACTTTCTTCCTGCGCTGTTACACTGTGAAGGGGGGATGCACCGGCTCTAGTTGGGGGGCTGCTGAAAAATGAttgacacaataataataatcataataataatgccacaCAATCGCGCAGGTGATGATACGCCAGCGTTGTTGTGTGTGGCTGGCAGACAGCAGCCCACCCCGACCAAGACCCCCAGGCTAGCGGTGAAAGCAGCGAATGCACGCCGGGCTACACACTCACTCCTCCGCCTGCCTGCCCGCCTGCCTGCGCGTCGCTCGGTCGCTCGGTCTGCGGGAGACGGTGAGGATTTGGCGAGATCAGCGCGATGTGCAGCGCCGGCCCCTTGTGTTTTGCGCCGCGTCCCGGAGGCGCACTTCCGCCACACTGCCGGGCTGCTGCCCTCACTCCCGCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190177 True 1038 TUCP 0.54 1 18411488 18412525

Neighbor

gene id symbol gene type direction distance location
AMCG00000560 NA coding downstream 21820 18379788 ~ 18389668 (-)
AMCG00000556 NA coding downstream 49602 18357174 ~ 18361886 (-)
AMCG00000557 rtn1a,rtn1b,LOC108257846,LOC108434986 coding downstream 63504 18336931 ~ 18347984 (-)
AMCG00000558 NA coding downstream 97713 18311055 ~ 18313775 (-)
AMCG00000566 ppp1r13b coding downstream 125153 18283337 ~ 18286335 (-)
AMCG00000554 NA coding upstream 7477 18420002 ~ 18425413 (-)
AMCG00000574 six1,six1b,LOC107589069,LOC107697302,LOC107563694 coding upstream 99521 18512046 ~ 18515368 (-)
AMCG00000575 NA coding upstream 113102 18525627 ~ 18533841 (-)
AMCG00000576 NA coding upstream 153840 18566365 ~ 18569134 (-)
AMCG00000582 prkch,LOC100380676,LOC106598906 coding upstream 189360 18601885 ~ 18602337 (-)
G151071 NA non-coding downstream 37391 18373798 ~ 18374097 (-)
G150965 NA non-coding downstream 310592 18099578 ~ 18100896 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding downstream 610532 17779228 ~ 17800956 (-)
G150853 NA non-coding downstream 644753 17765947 ~ 17766735 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding downstream 646087 17764590 ~ 17765401 (-)
G151119 NA non-coding upstream 24758 18437283 ~ 18453200 (-)
G151122 NA non-coding upstream 37019 18449544 ~ 18522790 (-)
G151133 NA non-coding upstream 82124 18494649 ~ 18565715 (-)
G151150 NA non-coding upstream 170883 18583408 ~ 18584113 (-)
G151167 hif1a,LOC102795631 non-coding upstream 232344 18644869 ~ 18646177 (-)
AMCG00000559 NA other downstream 103695 18305085 ~ 18307793 (-)
AMCG00000539 NA other downstream 401638 18006674 ~ 18009850 (-)
AMCG00000521 NA other downstream 533138 17876369 ~ 17878350 (-)
AMCG00000529 NA other downstream 692317 17685565 ~ 17719171 (-)
AMCG00000533 NA other downstream 833105 17553718 ~ 17578383 (-)
G151088 NA other upstream 315 18412840 ~ 18413465 (-)
G151089 NA other upstream 1530 18414055 ~ 18414558 (-)
G151090 NA other upstream 2997 18415522 ~ 18415841 (-)
AMCG00000599 NA other upstream 921192 19333717 ~ 19336742 (-)
AMCG00000613 NA other upstream 1091174 19503699 ~ 19531054 (-)

Expression


Co-expression Network