G151088


Basic Information

Item Value
gene id G151088
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 18412840 ~ 18413465 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190178
GGCCGTCTCGGTGGCCGTGTTGATGACCAGTGAGTACTCGGCGATGCACAGGGTGACCCAGCTCAGCACGAACACCGGCACGGCCGCCCCGGTGCCGCTGAACAGCGCCACCAGCCGGTCCAGCAGCAGGTACCAGGTGCCCAGCCCGCACAGAGCCCCCGCCAGGGCGGCGTGCAGCACGATGTTCGCAGCAAACTTCTTCCCGGGCACAATGAAGCGGACGGTGTCGGCACTGGCGCAGCCGGCGAACTCCACCTCCTCCTCGTCGGCCAGGATGCTGGGGGTCTGCAGCCGCTGCACGGGCACCGCCCTGCGCAGCACCCACGCGCACAGCGCCTGCACCCCCAGCGCCACGCACAGCATCAACCCCCCCGCCAGCGCGGCCGCCTGGTAGTCCTCCAGCAGCCGCAGTTGGTGCAGCAGCGTGGCCGCCCCCCCGAGCAGCCAGGGCGCCAGGAACAGGATCGCCTGGTTGGCGTAGACGTACGGTGGGGCGCAGAAGCCCAGCTTGAAGCGGGGGCCCCCCAGAACGGTCTGGGGGAACCGCTTCCAGAAGAAGTCCTGCTTATACTCATTGAGCAGTGGCACGTCCGGGCCCATCCTGATCAGCGCCAGCAGGAGGCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190178 True 626 TUCP 0.69 1 18412840 18413465

Neighbor

gene id symbol gene type direction distance location
AMCG00000560 NA coding downstream 23172 18379788 ~ 18389668 (-)
AMCG00000556 NA coding downstream 50954 18357174 ~ 18361886 (-)
AMCG00000557 rtn1a,rtn1b,LOC108257846,LOC108434986 coding downstream 64856 18336931 ~ 18347984 (-)
AMCG00000558 NA coding downstream 99065 18311055 ~ 18313775 (-)
AMCG00000566 ppp1r13b coding downstream 126505 18283337 ~ 18286335 (-)
AMCG00000554 NA coding upstream 6537 18420002 ~ 18425413 (-)
AMCG00000574 six1,six1b,LOC107589069,LOC107697302,LOC107563694 coding upstream 98581 18512046 ~ 18515368 (-)
AMCG00000575 NA coding upstream 112162 18525627 ~ 18533841 (-)
AMCG00000576 NA coding upstream 152900 18566365 ~ 18569134 (-)
AMCG00000582 prkch,LOC100380676,LOC106598906 coding upstream 188420 18601885 ~ 18602337 (-)
G151071 NA non-coding downstream 38743 18373798 ~ 18374097 (-)
G150965 NA non-coding downstream 311944 18099578 ~ 18100896 (-)
G150865 calm1,LOC107396020,LOC102293206,LOC102778633,LOC103380713 non-coding downstream 611884 17779228 ~ 17800956 (-)
G150853 NA non-coding downstream 646105 17765947 ~ 17766735 (-)
G150852 psmc1,LOC108443803,LOC108428647,LOC107581524 non-coding downstream 647439 17764590 ~ 17765401 (-)
G151119 NA non-coding upstream 23818 18437283 ~ 18453200 (-)
G151122 NA non-coding upstream 36079 18449544 ~ 18522790 (-)
G151133 NA non-coding upstream 81184 18494649 ~ 18565715 (-)
G151150 NA non-coding upstream 169943 18583408 ~ 18584113 (-)
G151167 hif1a,LOC102795631 non-coding upstream 231404 18644869 ~ 18646177 (-)
G151087 NA other downstream 315 18411488 ~ 18412525 (-)
AMCG00000559 NA other downstream 105047 18305085 ~ 18307793 (-)
AMCG00000539 NA other downstream 402990 18006674 ~ 18009850 (-)
AMCG00000521 NA other downstream 534490 17876369 ~ 17878350 (-)
AMCG00000529 NA other downstream 693669 17685565 ~ 17719171 (-)
G151089 NA other upstream 590 18414055 ~ 18414558 (-)
G151090 NA other upstream 2057 18415522 ~ 18415841 (-)
AMCG00000599 NA other upstream 920252 19333717 ~ 19336742 (-)
AMCG00000613 NA other upstream 1090234 19503699 ~ 19531054 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other upstream 1230399 19643864 ~ 19646607 (-)

Expression


Co-expression Network