G151198


Basic Information

Item Value
gene id G151198
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 18791375 ~ 18824668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190327
CATAGTTTAATTGCCACAACGTATTTACACTGGAAAACACCGAAGCAATGACAATACAAACAGCAGAATACAAACACTACAGGGTGCGCaggaaataaagagagaaaagtcATGGATATTAACTACGTCTaacagatttaaatacattttgtatttgattaggTTCGAGTTATTGCTGTTACCAGTGTAATACCTGGCGTTCAGGAAGTGTCCAGTACGGAGCTATTGCATAGAGAGTACAGGCACGGGGGCGAGCGCAGGGGACACAGCAGACATAAAATAATGACCAAAGCCTGATGTTCCTGAGTTCATCTTAAAGCAAACGTCCACATAAACCTTTGTATCGGCCTGCCCCCCCTCACACAGGGTGACGTCCAGGGCTCAGAGCTGGGAAGGCAAGTCAGTGGCCTTGTGCCCCCCCTAGTGATACATCTGTGAAAGTGACTTTAAAGTTTATTGGCCCTGGAAGCCCCAACCCCTGCCCCGCTGGTTTGTATTTCAACCGaactcccaattacttaattgaacccttaattgacaTAATAATTTCCTACATCAGagccatttcattattttaaacagtagggggtttaagttaagtatagaattgtataaagaacgtATTAAagaagcaattattttattacaacaaTTTAagaagtaaaatctaagcagattgtttcttccattaaggttcaattaagtcactgggagctcggttggaacaccAGGGCCAGGGCTGAGGTCCCCTGCACTACAGGAAGCTGCTGTCTGCTGACCGTCCGTTCCCCTGAAACAGCTTCTCCACACGGAAGATGCATTTAGTGTTTgtcatcattatcatttttaaaaaggacacACCACTCATTAATACTGGCATTTCATCGACTCCCAGTCTCCCGTCAGCTGTACGTCTCACTGGGTTAGAGAGGCACAACACACAGTGGAGCGGCCGCAGCGCACTACTGAAGTAGgccacacacaatacacacacatacacacacaatacactcacacatacaaacacacaatactcacacatacaataaacacacacacacaatacactcacacatacaaacacacaatactcacacatacaataaacacacacacacacacacacacaatacacacacacaggaattcATTCAGACAGAGCCGCTGTTCACACAAGGCTGCTATTGGCGAACGTTTACAAAAGCCTGTGTGACAGAAAGCAAGATGCACGTACATGTGAATCCACTGTGAGAGAGTGGTGGCAAAGCTTGTACGAGGTGACCGGAGTGTAAAGAGGCGGAGCTCAGTTACATGTGGTTCCTGACCTCACTGCTGAGCTCTCACACTGAGGTTTCAGTAAGGTATGTTTGCAGAGGAACATTTGACACTGCGACCCTTCGGACAGCAGGTCTGGGTTATAGGATTCAAGGCACCTGTGAAAGACGATAAGACGATATCCCCAACTCTGGCGACTGCGCAGCCCCACCCAGACCACAgttttacagaaatacaaaaattcAACCTGCAAACCTTCAGACACGAAGGAAACCCGACTTCCGTGTTACCTCTGTGATTGTCGAGAGCAGCGGAAGGCATCTCTGTGGGTTCAGAGCACggacacatttttaaaagcctacaaaacaacaacagtcgaacaaacacaaatactgtCTCGGACAAGGGGACTGGATATGAAACGCTGAAACAGTTCCTCTGCCCTTGAGGTGTTGGGCAGCTCTGGCCGCTGGGCGAACACCACGGGAGCCCCTTTGTGCGGCACACCGCCCCGCGCTTCAAGGCCGGGTCGCAACGGGTGAATCGGCACTCAGACTCTGCTTCCCGGAGAGGCCGGCGCAGTGTGGGGTGTCTGAGCCACGCTCTGGACATTTGGTTACTGTTTAGAAGACTTAATTAAGGCACTTGGTTTAAACACTGCAATGCTGTGTTTAGGAGGAGACCCCGACTGTCTCGGTTCACAGCTGCCGGAGGTGGCGTGGACGGCCATGACGCGGTGGCCATGCTGGTGGAAGGCACGGGAAGAGCGTGTAGGCAAACGTAAACTTACAATCCAtcttgtgtgtgcgtgtgcgctcCTCCTTTAACGTCCTGGCCGACGCGGGTTGGTCAAGCTGCGTCTCTGCACGTCGTCTCTGCAGCTGCGTTCGAGGAGGTAGAAGGCACCGAGGAGAGGGCGGCCCCCGGACCGGCAGGCTCGGCCAGACGCAGACGGGGTCCCCAGCGAGTGAGGGCGAGGGCAGGGATGGCGAGAGGACGCCAGCTGTGATCCTGGAGCCGCAGAGCTGCCGACTTTCGCTTCATCCGAGGCAGAGATGGACTGAACTGGTGAGAAGGATCGTCCGTCTCCGGGTGTTGAGCGATGACTGGCAGAGATCTCCGAGCACCGCGGGACGGACAGGCGTTTACTGACCGCAGTTTATTCAAGAACGACTGCCAACTTTTAAACCCCGGTACAGGAAAGGTGGACACCGCCGTGCTCGTACAGACGCCTTTAAAAGGACGGCTGCTCCACCTCAAAGCTCAGTCTGATTGCTGCTGCTTCACAGTATCCCAGAGGAAATGTCAATCTTGTGCAACATCCCTACAGTATTGTCGTTCAcaagtgtttcttttctttatatttaaggGAGCATTTAACCACCCAGACAAGTACAGTATTTGAATCTACATAAAACAACTGCACAAAACCAGATGCAATGCAAGGAAAAGCACATGGTGCTGCTGGTCATACGGTACTGTAGCGTGTTGAGAATATTGCATGTAAAAAAATCTGGCACTTTTCACACAGTTTGTGTTGAGGGGCCGCTGTGAAGCCAGAgcataaaacacacagaggtTTAAAACCACACGctttaagtgttttttctgGATTAaggcaattaaacaattaagaataataaagaCACCAGCGATTTTTCAGCgtaaaaagacagacagacaggtgtgtGAGAAGGATAAGATACCGAAGAAGATAAGGCCTCGGTGTGGGGGTGCAGGATCTGCGCTGCTCTTTGGTTCGACTGCTGGGGGGTCAGGCACGCGCTTCTGCAAGGGCAGGGGGGCAGCGGCGAGTATCATTCATTCACCCTTCCCTGGGGGGGCAGAGAGCAGGGAGGTGGCGCCGGATCCGGACCGTATCTCCCCCGTCGGGCGCCGGGCCGAGATGacggagagggagggagtgggagagagggggtCAGGGAGAGGGagggagtgggagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190327 True 3241 lncRNA 0.50 3 18791375 18824668

Neighbor

gene id symbol gene type direction distance location
AMCG00000570 kcnh5 coding downstream 36067 18748050 ~ 18755308 (-)
AMCG00000582 prkch,LOC100380676,LOC106598906 coding downstream 189038 18601885 ~ 18602337 (-)
AMCG00000576 NA coding downstream 222241 18566365 ~ 18569134 (-)
AMCG00000575 NA coding downstream 257534 18525627 ~ 18533841 (-)
AMCG00000574 six1,six1b,LOC107589069,LOC107697302,LOC107563694 coding downstream 276007 18512046 ~ 18515368 (-)
AMCG00000588 gphb5 coding upstream 233 18824901 ~ 18831169 (-)
AMCG00000590 ppp2r5e,LOC106599033 coding upstream 9033 18833701 ~ 18853270 (-)
AMCG00000592 NA coding upstream 32268 18856936 ~ 18859417 (-)
AMCG00000591 NA coding upstream 40940 18865608 ~ 18876065 (-)
AMCG00000598 NA coding upstream 177154 19001822 ~ 19023749 (-)
G151167 hif1a,LOC102795631 non-coding downstream 145198 18644869 ~ 18646177 (-)
G151150 NA non-coding downstream 207262 18583408 ~ 18584113 (-)
G151133 NA non-coding downstream 225660 18494649 ~ 18565715 (-)
G151122 NA non-coding downstream 268585 18449544 ~ 18522790 (-)
G151119 NA non-coding downstream 338175 18437283 ~ 18453200 (-)
G151218 NA non-coding upstream 31632 18856300 ~ 18856497 (-)
G151291 LOC108257835 non-coding upstream 164407 18989075 ~ 18992844 (-)
G151393 NA non-coding upstream 574054 19398722 ~ 19400093 (-)
G151416 NA non-coding upstream 656660 19481328 ~ 19483307 (-)
G151446 psma3,LOC107729246,LOC107725600 non-coding upstream 787582 19612250 ~ 19619068 (-)
G151090 NA other downstream 375534 18415522 ~ 18415841 (-)
G151089 NA other downstream 376817 18414055 ~ 18414558 (-)
G151088 NA other downstream 377910 18412840 ~ 18413465 (-)
G151087 NA other downstream 378850 18411488 ~ 18412525 (-)
AMCG00000559 NA other downstream 483582 18305085 ~ 18307793 (-)
AMCG00000599 NA other upstream 509049 19333717 ~ 19336742 (-)
AMCG00000613 NA other upstream 679031 19503699 ~ 19531054 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other upstream 819196 19643864 ~ 19646607 (-)
G151593 NA other upstream 1807421 20632089 ~ 20634946 (-)
AMCG00000635 NA other upstream 1919711 20744379 ~ 20752657 (-)

Expression


Co-expression Network