Gene
RNA
| Item | Value |
|---|---|
| gene id | G151447 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 19621137 ~ 19623387 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU190684 | True | 808 | lncRNA | 0.52 | 3 | 19621137 | 19623387 |
| TU190685 | False | 456 | lncRNA | 0.48 | 2 | 19621137 | 19623387 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000619 | NA | coding | downstream | 27588 | 19552361 ~ 19593549 (-) |
| AMCG00000611 | sstr1,sstr1a,LOC107729242,LOC107586672,LOC107693103,LOC107734409 | coding | downstream | 134095 | 19485939 ~ 19487042 (-) |
| AMCG00000607 | NA | coding | downstream | 239006 | 19378217 ~ 19382131 (-) |
| AMCG00000608 | LOC107589661,LOC107679124 | coding | downstream | 243516 | 19361226 ~ 19377621 (-) |
| AMCG00000609 | cfl2 | coding | downstream | 262922 | 19354563 ~ 19358215 (-) |
| AMCG00000615 | NA | coding | upstream | 259077 | 19882464 ~ 19887052 (-) |
| AMCG00000625 | gpr135,LOC107564991 | coding | upstream | 347091 | 19970478 ~ 19971836 (-) |
| AMCG00000624 | l3hypdh,LOC107684001 | coding | upstream | 348984 | 19972371 ~ 19974873 (-) |
| AMCG00000623 | jkamp | coding | upstream | 351729 | 19975116 ~ 19988480 (-) |
| AMCG00000633 | lrfn5,LOC106601106,LOC106611182,LOC108443922 | coding | upstream | 634790 | 20258177 ~ 20269173 (-) |
| G151446 | psma3,LOC107729246,LOC107725600 | non-coding | downstream | 2069 | 19612250 ~ 19619068 (-) |
| G151416 | NA | non-coding | downstream | 137830 | 19481328 ~ 19483307 (-) |
| G151393 | NA | non-coding | downstream | 221044 | 19398722 ~ 19400093 (-) |
| G151291 | LOC108257835 | non-coding | downstream | 628293 | 18989075 ~ 18992844 (-) |
| G151218 | NA | non-coding | downstream | 764640 | 18856300 ~ 18856497 (-) |
| G151678 | NA | non-coding | upstream | 1188153 | 20811540 ~ 20812254 (-) |
| G151725 | NA | non-coding | upstream | 1291054 | 20914441 ~ 20914680 (-) |
| G151726 | NA | non-coding | upstream | 1291854 | 20915241 ~ 20916217 (-) |
| G151727 | NA | non-coding | upstream | 1292843 | 20916230 ~ 20917085 (-) |
| G151739 | NA | non-coding | upstream | 1356686 | 20980073 ~ 20980345 (-) |
| AMCG00000613 | NA | other | downstream | 90083 | 19503699 ~ 19531054 (-) |
| AMCG00000599 | NA | other | downstream | 284395 | 19333717 ~ 19336742 (-) |
| G151090 | NA | other | downstream | 1205296 | 18415522 ~ 18415841 (-) |
| G151089 | NA | other | downstream | 1206579 | 18414055 ~ 18414558 (-) |
| G151088 | NA | other | downstream | 1207672 | 18412840 ~ 18413465 (-) |
| AMCG00000618 | timm9,LOC107729247,LOC107689314,LOC107693171 | other | upstream | 20477 | 19643864 ~ 19646607 (-) |
| G151593 | NA | other | upstream | 1008702 | 20632089 ~ 20634946 (-) |
| AMCG00000635 | NA | other | upstream | 1120992 | 20744379 ~ 20752657 (-) |
| AMCG00000653 | NA | other | upstream | 1303304 | 20926691 ~ 20935429 (-) |
| G151771 | NA | other | upstream | 1814880 | 21438267 ~ 21457795 (-) |
