G151593


Basic Information

Item Value
gene id G151593
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 20632089 ~ 20634946 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190879
ttttttgtgtccaAGGCAGGTATGCACCTTTAAATCCCAAGCTGCCCtaagtgaaagtgaaagcaaGGCAAGGTATCTGCACCGCGACTGGAGTTGCTCAGACACGGCCCCAGCGGAGCTCAGATCTCCACTAAAACCACAGTCGTGTAGAGGCGCCGGCCGATGACACACGGGCTCTGAATGGCCCAGCAGGCGCAGGGTGAAGTGGAGGCGGCCGAGGTCAGGGGCTCAGACGACCACACCGCCACAACCGTCCCCGCGACAGAGGCTCCCGGACAGGACGCGCCGGAGGATGGTGGGGGCCAGGCGGACGGGCTCGGGTTCGAGAGACCACGGGGGGTCCTGGGGAAGGTGAGGAGGAGCTTCAGGGAGAGTTTCCGCAAGGCGGCGCAGGCGACCAGCCCCACCGGCCTGCTCCCTTTCCGCAGGAGGTCGAAGGACGAGGGAGCCGACCGTCACAGGCCCGATGAGGAAGACTCTGTCTCCAAGACGGGGTCGCAGCCCCCGGACTCCCCAAgtcaaaggtcaggaGGACCCCACAGCCCTGAGGCCACCTCTCCCTTCAAGAAGTATGGGCGCTTCAGCTTGAAGGCCCGGGTGGAGAATGGCAGCCCCTCGCCAGACCCCCAGCCGCCCTCCACACCGAACTCAGGTACTGCACCGAAACTGAGCTGCATACATTTCCAAACCGTCTCTAAAACACATGGCTGT

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190879 True 711 TUCP 0.63 3 20632089 20634946

Neighbor

gene id symbol gene type direction distance location
AMCG00000631 NA coding downstream 4531 20620472 ~ 20627558 (-)
AMCG00000630 NA coding downstream 14363 20601669 ~ 20617726 (-)
AMCG00000627 NA coding downstream 82510 20545857 ~ 20549579 (-)
AMCG00000628 pnn,LOC107586617 coding downstream 87362 20540008 ~ 20544727 (-)
AMCG00000629 NA coding downstream 92444 20531193 ~ 20539645 (-)
AMCG00000632 LOC107684818,LOC107723542,LOC107746282 coding upstream 31688 20666634 ~ 20668013 (-)
AMCG00000636 NA coding upstream 99637 20734583 ~ 20741064 (-)
AMCG00000644 NA coding upstream 135135 20770081 ~ 20791578 (-)
AMCG00000645 tecpr2,LOC106600983 coding upstream 177334 20812280 ~ 20835927 (-)
AMCG00000647 NA coding upstream 201438 20836384 ~ 20837506 (-)
G151447 NA non-coding downstream 1008702 19621137 ~ 19623387 (-)
G151446 psma3,LOC107729246,LOC107725600 non-coding downstream 1013021 19612250 ~ 19619068 (-)
G151416 NA non-coding downstream 1148782 19481328 ~ 19483307 (-)
G151393 NA non-coding downstream 1231996 19398722 ~ 19400093 (-)
G151291 LOC108257835 non-coding downstream 1639245 18989075 ~ 18992844 (-)
G151678 NA non-coding upstream 176594 20811540 ~ 20812254 (-)
G151725 NA non-coding upstream 279495 20914441 ~ 20914680 (-)
G151726 NA non-coding upstream 280295 20915241 ~ 20916217 (-)
G151727 NA non-coding upstream 281284 20916230 ~ 20917085 (-)
G151739 NA non-coding upstream 345127 20980073 ~ 20980345 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other downstream 985482 19643864 ~ 19646607 (-)
AMCG00000613 NA other downstream 1101035 19503699 ~ 19531054 (-)
AMCG00000599 NA other downstream 1295347 19333717 ~ 19336742 (-)
G151090 NA other downstream 2216248 18415522 ~ 18415841 (-)
G151089 NA other downstream 2217531 18414055 ~ 18414558 (-)
AMCG00000635 NA other upstream 109433 20744379 ~ 20752657 (-)
AMCG00000653 NA other upstream 291745 20926691 ~ 20935429 (-)
G151771 NA other upstream 803321 21438267 ~ 21457795 (-)

Expression


Co-expression Network