G151678


Basic Information

Item Value
gene id G151678
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 20811540 ~ 20812254 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190976
CGCAGTGTGTGTAATCCAGGCTGGGGGCGACTGCACTCCTCAAGAGCCTCATCTGAGCTGTTAATTAGGTATGTTATTAATTGCTTGGTTAATTAGGTTCGTTATTATCTTCACTGCAGTAGTTTGACCTGGTTTTAGTTGGTTCTGAAGGGCTCAGTGATTCTGTCGGGTCTGTGCCCTCCAGAACCAGCGCTGGgctccattttaattgttttattgaacCTGAAATGGATCGAGATGGCCGTTCCAGAACAGTGTCCAGGGCTGAGCCAGGCTTCTGAGAACATGAAGAACCGTGATGGAATGATATCTGTTTTGTTCGCTTTTTCAATCTACGTATTATTGacattttccaattatttaTAAACTTGTTTACACTTTGAATAACTGAAGGCAGGAGACAAAATAAGGGAGATTATTCTAATGGCTACACAGAAACTGGTGTgtgagttagtgtgtgtgtgtgtgtgtgtgtgtgtcggccATCCATCAGCTCTTGTCTGCTCCACTCCTGTGACACACCCCGATATTATGGAGCTCACAGCGTGTCCACCCCCACGCCTGGTGCTCACAAGCTGTCAGGAAGCCTTGCGATGAGTCAGGGAGGAGAagtgcagctgtgtgtttgCCCCCCCAGTACAGTAAATACCCTGCAGTGAAAGCTGTGAATCTGCGTTTAATTTATATGATCCTACTCATTATGTGACCGATTCCT

Function

GO:

id name namespace
GO:0045333 cellular respiration biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190976 True 715 lncRNA 0.46 1 20811540 20812254

Neighbor

gene id symbol gene type direction distance location
AMCG00000644 NA coding downstream 19962 20770081 ~ 20791578 (-)
AMCG00000636 NA coding downstream 70476 20734583 ~ 20741064 (-)
AMCG00000632 LOC107684818,LOC107723542,LOC107746282 coding downstream 143527 20666634 ~ 20668013 (-)
AMCG00000631 NA coding downstream 183982 20620472 ~ 20627558 (-)
AMCG00000630 NA coding downstream 193814 20601669 ~ 20617726 (-)
AMCG00000645 tecpr2,LOC106600983 coding upstream 26 20812280 ~ 20835927 (-)
AMCG00000647 NA coding upstream 24130 20836384 ~ 20837506 (-)
AMCG00000646 NA coding upstream 26951 20839205 ~ 20844566 (-)
AMCG00000652 NA coding upstream 105408 20917662 ~ 20920464 (-)
AMCG00000651 NA coding upstream 123284 20935538 ~ 20938564 (-)
G151447 NA non-coding downstream 1188153 19621137 ~ 19623387 (-)
G151446 psma3,LOC107729246,LOC107725600 non-coding downstream 1192472 19612250 ~ 19619068 (-)
G151416 NA non-coding downstream 1328233 19481328 ~ 19483307 (-)
G151393 NA non-coding downstream 1411447 19398722 ~ 19400093 (-)
G151291 LOC108257835 non-coding downstream 1818696 18989075 ~ 18992844 (-)
G151725 NA non-coding upstream 102187 20914441 ~ 20914680 (-)
G151726 NA non-coding upstream 102987 20915241 ~ 20916217 (-)
G151727 NA non-coding upstream 103976 20916230 ~ 20917085 (-)
G151739 NA non-coding upstream 167819 20980073 ~ 20980345 (-)
AMCG00000635 NA other downstream 58883 20744379 ~ 20752657 (-)
G151593 NA other downstream 176594 20632089 ~ 20634946 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other downstream 1164933 19643864 ~ 19646607 (-)
AMCG00000613 NA other downstream 1280486 19503699 ~ 19531054 (-)
AMCG00000599 NA other downstream 1474798 19333717 ~ 19336742 (-)
AMCG00000653 NA other upstream 114437 20926691 ~ 20935429 (-)
G151771 NA other upstream 626013 21438267 ~ 21457795 (-)

Expression


Co-expression Network