G151726


Basic Information

Item Value
gene id G151726
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 20915241 ~ 20916217 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191028
CAGGGATTAGGAAAGAGAATGAAATGCAGACCTGAGAGGCCGGGGTTGCTGTGCGCTCTGGTCATCAGGCCCTTGATCTCCCCCCCCTCGGGGTAGCGGTGCACATTGTAGTAGGTGTGTGGgggcttggggggggggggcgactCCACAggggccggggccggggccTGGGCCGTGTCCTGGGGTGCCTTCTCCTCGACTGCAGACAAAGCCAGGAAAGAACAAATCAACTCCTGGCTTTTAtcaccctctctttctctgtgttgcaTGCTGGGAGTGCGGGAAGTCTGCAGTCCTCAATAACAGCCCATTTGGCATGACTTTGAGTGAGCTACCTGTCAGACCACAGCATTGTGCTGCCTAAAGTTTTATTTGCTGATTCTAGAACATGCAACccattttggcattttaatacAGGACTTTTGAAGGATGCTTGTTGAGGCCCTGGGGTGGCTTCGGCTGGTCCCTGGAGCCAGCACAATGACTTAACACTAACAACTAGAAACCAACAGTTAAATTCGAtttacaaaaagcaaacaaataaatgtccactgatttaaaatgcagagaGACTTGTGTGTATATCATCTTAAATGTTTGCGGGTTTCCCCATGATGTTCGATGTGTTTTGCTTGTAAACAACAATCTCTGACCTGGTTTGGGAAGAGGGCGACTCAGTGAAGAGAGAAGCGcccacagacaaataaataaattaaatggagaaagagaggggtcGGAGGTGAAACTTCAGTCATTTGCAGGTTCTTTATCAGAGAGTTAAAGACGTGGCCGTGGCGTTCAGGGCCTGGCTCACTCATGTCCTGCTCTTCTGGAGGCTGGGGGTGTTCGTCAGAGGTCATGTTGGGGTCAGGGGGCGGGACTGTGGCAGCGGACCCTGAATCGATGTCATCCCCAGCAGGAGGGTCCGCAGACTCCGATTCCTGCTGCAGTTTGAAGGAGGGGGTCCTCCTGCAtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191028 True 977 lncRNA 0.52 1 20915241 20916217

Neighbor

gene id symbol gene type direction distance location
AMCG00000646 NA coding downstream 70675 20839205 ~ 20844566 (-)
AMCG00000647 NA coding downstream 77735 20836384 ~ 20837506 (-)
AMCG00000645 tecpr2,LOC106600983 coding downstream 79314 20812280 ~ 20835927 (-)
AMCG00000644 NA coding downstream 123663 20770081 ~ 20791578 (-)
AMCG00000636 NA coding downstream 174177 20734583 ~ 20741064 (-)
AMCG00000652 NA coding upstream 1445 20917662 ~ 20920464 (-)
AMCG00000651 NA coding upstream 19321 20935538 ~ 20938564 (-)
AMCG00000638 LOC106528523,LOC107589717,LOC107756760,LOC107669728,LOC107685091 coding upstream 113195 21029412 ~ 21030347 (-)
AMCG00000639 NA coding upstream 124992 21041209 ~ 21045473 (-)
AMCG00000640 LOC102294743,LOC101473355,LOC100707633,LOC102192616,LOC105930114,LOC103476188 coding upstream 173380 21089597 ~ 21091487 (-)
G151725 NA non-coding downstream 561 20914441 ~ 20914680 (-)
G151678 NA non-coding downstream 102987 20811540 ~ 20812254 (-)
G151447 NA non-coding downstream 1291854 19621137 ~ 19623387 (-)
G151446 psma3,LOC107729246,LOC107725600 non-coding downstream 1296173 19612250 ~ 19619068 (-)
G151416 NA non-coding downstream 1431934 19481328 ~ 19483307 (-)
G151727 NA non-coding upstream 13 20916230 ~ 20917085 (-)
G151739 NA non-coding upstream 63856 20980073 ~ 20980345 (-)
AMCG00000635 NA other downstream 162584 20744379 ~ 20752657 (-)
G151593 NA other downstream 280295 20632089 ~ 20634946 (-)
AMCG00000618 timm9,LOC107729247,LOC107689314,LOC107693171 other downstream 1268634 19643864 ~ 19646607 (-)
AMCG00000613 NA other downstream 1384187 19503699 ~ 19531054 (-)
AMCG00000599 NA other downstream 1578499 19333717 ~ 19336742 (-)
AMCG00000653 NA other upstream 10474 20926691 ~ 20935429 (-)
G151771 NA other upstream 522050 21438267 ~ 21457795 (-)

Expression


Co-expression Network