AMCG00000684


Basic Information

Item Value
gene id AMCG00000684
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 100069 ~ 110524 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000684
ccaGTAATGGTCAATACAATTTTTCTCacaaaattgaaagcaaaattaaaGCGCCTTTCCAAATGGCATCGCACAGATGGCCGGGAGGACGCTTTTGGTCCGATTTGATCGCATGTGGGACGCTATTGGCTGTAGCTGCTGTCTGTCAGTGATTCAGCCAATGGGACGCAGGCTTTGGCCTGGGGGCGGGGCGCTGAGGGAGACTCGGTGCGCAGACGCGGGCGCAGGTCGGCCGGCTGGGCTCGTAATGTCGTCCGGGGGAAACTCGCTGTTTATCTATGCATTCAAAATGTGACTCGCTAGTGAATTTATCTTCTtcaaatgctttaaataaagTACAACCCCGGAGTTGATATTTACATCTTTGTTTTAGCAAAACAATATTTCCATGTGTTTTGGAAACGTTTACACAGCGTTTTTTAAACGATACAAAGCGCAAAGGCATATGGGAAATacgtttgttttcatgtttgttttgtttgcgtTGCAGGTGTATAGGTTTCAGTAAACCTGAGCCTGCTATATTAATCCCGCCCCTCCCCTCCAAAACTAACCGAACAGACACCCGTCGGGTACGTGCGAAAAGGACGCTGCGTGACGTCATGGCGCTGTACCTGTTCGACGCGCACCCCACCTGGACCCCCGCCTTCCTGCAGGGCTGCCGGCAGGGCCAGGTGCTGCTGCCGCCCCGGAGCGCCGCTCTGCCGCTGTACGTGCCCCTGCAGGGCCACCCGCTGGCCCCGGAGCCGGGCATGGGCAGCTTTGGCGTAGCGCCAGTGGACAACGTCCCATTTGCGATCCCCTTTGGGCAAACTCATTTCTGTGACATGGCTGCCCTGTCCTGGATCGATAAGGAGGCCCGGAAATTCCACATTAACAGGGCCGTGTTCGACTTGGTCTCACCGGGGGGCGTTCTAGAGCTGACCGACCCGAAGCTGCTGGGCTGGTATCTGTCCCTGGCCGTGGAGGACCGGTCTCTTGTGCAAGGGCTGTACAGGACGCGGCGTGATCACCAGGACGTGCCGGAGATGTCCTCCAAGCTGAACAAATCGAGAAGACCTGCTTTCTACAGCTTGTCTGAGCGGCGGCGCTGTGAGCATGGCTTTAGCCTGGACGCCCCGAAGCCCGGGCAGAGTTGCCCCCTGCCCCCGCCGACGCTGTGCTTGTCAGagatggagagagagctgCTCCCACGCTGCATCAAGCAGGAGCTGAACCTCAGCGCCCCCCCCCGAGCCCCTGGGTCAGAGGCCATGGTGCGGGGGGCCGGCGATACCCCACTGGACTTCGCCGAGAGTTTCCAGATGGCCTGCGAGAGCCGATGCAAGGCAGGCGATTGGGAGGATGGGGTCGCAGTGAGGGAGTCTCCCAGCACCTCCGGTGTGTCGTCCGACCTCTGGGTCACAGGGGCATCCACTGGGGAGGAGACCCTGGGCCGGGCCAACACTTCTTTGGACGTGGAACTGGAGCTTCGCGGAAGGGAAACTGGGGTTGATGAATGCGTGCCGGGACCCCCTGGCCCGTCTGGAGCACAGGCCGAGCAGCTCTCTCTGGATCTGGAGAAGGAGACCCTGCCGCAGTACTACAGCTTTAGCAGCTCAGCACTGGACCTCACGGCCACCAGGCCCGGAGATTGGGAGACGGAGCAGTGCTGCGGGAGAGTTCCGGCCGCCCGGCACACAATGAGGCAGGGAGGAGGCGGCGAGGCTGAGGTCACGGACACGTCGTTcacctcttcctccctctcctcctcctcttcctcggcTGCGCTCGGCGCCTCCACGGACTGGCCCGACGAAGAGCAGTATCTGGACTGTGACTTTGCAGGCCGAGTCGATGCCTCAGGAGACTTCGAGATGGAGGAGCCCCCTGCCAGCTCTCGGAGCACTGCCCAGCCTATCCCCCGCCAGGCTGGCGACGTGGCGTCCTGCGCGGTGCCTGTGGGGAGGGACCGCCGCGGCGTTCAGACCAGCGATCCTTCCATGGGGACTCGTCTGGGTCAGTGGGGCGGCTGGGCGCTAGCGGAGGCAGAGCTGACCCGGGATGCTTCAGCAGACCCAGGTGAGCTCTCCTGCTCCCAGGAGTCCTTCATGTCCGCGTTGCCGGACGACAGCCTGGGCGTGAGTCCACTGGCGGCGGACGGGCCAGGTCAGGAGGGTGAGAGGGGCACCGGTGAGGCTCGGGGGGCATTTGGGACAGTCCCTGGCCTGGGGGCGAGAGAAGGGGAAGAGCCTGGCCCAGTGTGGTCCGCGCTTCAGACGAGCACAGAGGCCCTCGCTGCCCCGGTCACCGCCAGCCAGACCGGGCAGGACCAGGTGAGCAGGGACACCAACGCACAGCCCGGCCCGGCGCACCGCAGGGACGTGGCTGTGGGGACAGAGACCCCGGCCAAGGACAGGGGCACCCAGACTTGCCCCCCCACCACAGCGGAGAAGCACGTCATCACAGACATGTACATGAGCGACCTGGACTACTTCGTGGAGGAGTTTCTGAAGTTGCGGGCGGCTGAGGCGGAGCTGCGGGAGCTGAAGGACAAAGCGCAGAGtcctGCAGGGGGCGGCCTGGGTACTCCGGGGGGCTGCGGCAGTGACTGTGCCCAGCGGGCGGTGAAGGCCGAGCTGCGCCTCCTGGCTCTGCAGTACCGGCTGTGCGAGCAGCACTGCTGGAGATTGTACTACACTGCGCACGAAGGCGCCCTCTGCTCCCCGGGGCTGCCCCCCCCGGGCTCTGTGCTGGGGGCTCTGCAGGGGCTGTGCGCTCAGTACAGGGAGATCAGGGCTCAGGTCCAGGCCGGGATGTCGCTGGACCAGCTGCCCCCTCTGTCCATCAGCTGCTCCTGCCTGGTCACCGAGCGGCCATACTGTCCGGCACAGATGATGGAAGAGGACTCTCTGTTGGAGGAGGCGCCGTGTGGTGTGGAGGAGCGGTGCCGTGGGCCGGTTCAACACAGCGCCGCAGAGACCCTGCAGGCGGCCGCAGACGGGGGGGCAGGCAGGGGCGGCGTGGGAGCGTCGGAACAGCACAGTGGGAGCGTTGGCCGCGGGGCCGGGAGAGTGGGGGCCAACGGCACACAGCCTGCAAACACACCGCCTATAAACCCCAAAGACCAGAGCGTGAGCGAGAACTGGTTTGATGCAGCGGAAGACCTAGTGCCCCCCAGCCAGGGCGCCCCACGGCAGGACAGGGCCGGAGTCCAGCGGCAGGGCAGGGAGGAGAGCGTGACGTGTGCTGAAGAACGTCCCACCGGAGACGATCGCGGCCCGAGTTACCACCTGTGTGTCCGGAACCTGTCTGAGGACGTGACTGAGGAAGCGCTGATGTCGCTGTTCCAGAAGTACCAGGCGACGGGGGTGTGGTTTACCAACGTGGGAAACAATGCCAAGGTGGCCATCGTGACGGTCGGCAGTGCCAGGGGCGCCGAGACGGCCGTGCAAGAGATGAATGGCCGGGCAGTTCAGGGGCGGGCCATTAAAGTGGACGGCATCAACAAGCCCCCCGTGGCGATGCAGGGGTCCTCGAGGGCATCCAGGCCAAGCCCCCCCTGCCCGGCGGCAGCGGCTGCAAAGCCGTTTATCAGGAACCTGGCGAAGCGGATCGTTGTGCAGGAGACGCCCACGTCCTCGGGCACCTTCGCCCCACCGCACTACGCCACGCTGGGCAGCTTCGACCGGCTGATGGCGCAGCTGTCACAGCGGCACCCTGAGGCCAGCCGGCACCGCATCGTGGCGGCACTGCAGGAGCTCCGGGCGCGAAAGGAGGGCTTCCTGAGCGGTCTGCCCCTCAGGGACATCCTGGagatgacctctgacctcctCAGGGGACAGGCCACCGCCTCAGCCAGGGTCTAACCGGGTCGGTGCGGGAGGTTTCGGGCGATGgttacatattgttttatagtaagaaaaatgtaaagttaaaaTGGGCCTGAACTGGAGAGAGAAGAGGGTCGTCTGTGATGAGCCGAATCTTTATTTCCCCTCATTCTGTTTATGCCAAGCTGGCCTTCGATGccgtttgtgtttgtgttccccGGCTGTAGAGCGCCGGGCCGCTTCGGTTGTGTTGCATTAATCTGAATCTGTGTGGCTTTGTTTCTGTTGCTGGACAATAAACCCTGCTGTTGTGACTCCA

Function

GO: NA

KEGG:

id description
K25080 RBM44; RNA-binding protein 44

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000684 True 4131 mRNA 0.63 17 100069 110524

Neighbor

gene id symbol gene type direction distance location
AMCG00000685 NA coding downstream 9824 87659 ~ 90245 (-)
AMCG00000682 ramp1 coding downstream 23733 66652 ~ 76336 (-)
AMCG00000686 pofut2,LOC107741944,LOC107660604,LOC107565035,LOC107714363 coding upstream 1638 112162 ~ 119898 (-)
AMCG00000689 NA coding upstream 21109 131633 ~ 142509 (-)
AMCG00000688 unc80 coding upstream 35255 145779 ~ 192328 (-)
AMCG00000690 NA coding upstream 196957 307481 ~ 329049 (-)
AMCG00000692 acadl coding upstream 221699 332223 ~ 338261 (-)
G125498 NA non-coding downstream 7414 92283 ~ 92655 (-)
G125497 NA non-coding downstream 8784 91051 ~ 91285 (-)
G125515 NA non-coding upstream 10756 121280 ~ 127663 (-)
G125578 NA non-coding upstream 265296 375820 ~ 376770 (-)
G125591 NA non-coding upstream 299091 409615 ~ 410817 (-)
G125622 NA non-coding upstream 412997 523521 ~ 527501 (-)
G125625 NA non-coding upstream 487460 597984 ~ 598335 (-)
AMCG00000687 map2 other upstream 84120 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 1197297 1307821 ~ 1312408 (-)
G125814 NA other upstream 1276319 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1368216 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1651505 1762029 ~ 1771025 (-)

Expression


Co-expression Network