AMCG00000726


Basic Information

Item Value
gene id AMCG00000726
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1609083 ~ 1611379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000726
ATGGAGCGCTGCACCGTGAGCGTGTGGCCCCGCCTGGAGCCCTTCCTGCTGGGCGTGCTGCCGGCCGCCGCACCCCCCGCCAAGTTCAGCATGCACTACCTGCGCAAGATGGCGGCCTACGTGCGCTCCCGGGACGGCTGCTACCCCCGGCTGTGCTGGCCGCTGTGGCGCCACATCGCCTGCGGGAAGCTGCAGCTGCCCGGGGACACGGCCTGGCTGTACTTCGAGACCTTCGACTTGCTTGCCCCGCGGACCCCTGAGGAGCGGCTGGAGTGGGCGGAGGCGGCGTCGCAGTGCGAGACCCCCGAGGAGCTGGACACGCTGCGGCACAAGCTCTCTGTGGACACGCTGCAGTTCCTGCTCTTCCTGTACATGCAGCAGCTGAACCGTGTGTCTCTGCGCTCGTCTCTGATCGGGGAGGAGTGGCCCAGTCCGCGCTCCCGCTCCCCCTCCCCGCCCCCTGACCGTGACTCCAAGACCACCGCGCAGAACAAGaACTGGGACGATCAGGCCCACCTGGCGTTCGTGCAGGCCCACCTGTCGGAGCTGCTGGAGCTGGTGCTGGAGCCGGGGCAGGCGGGCCGGGGCTCGGGCCCGGGGGGAGCGCTGCGCGAGAGTCTGGTGTCGGCGGAGGCTCTGCGGGGCCTGAGCTTCGTGCTGGAAGGGTCCCTGAGCCGCGGCCGCGCCGTGCACCTGCTGCACGAGCTGCTGGGCTGGGGGCCGCTGCAGGGCCAGGCCGGTTACTCGGCGCTCACCCGCTGCTTCTCGCTGCCCCGGCTGCACGCCTGGCTGCGCGATGTCCTGGCGCCGAACCCTTTCGCCACCACCGCCTGCCTGCGCTCTGGGAGGAAGCTGGCCTGGGCCCAGCAAGTGGAGGGCTCTATGAAGCGGGCGAAGGTGGTACAGAACACGCACACGGCGCCGGAGGGCTCCAGGCTGGTACTGATGTCTCAGGTCTTCCGCCAGACGCTGGCCAAGAGCTCAGAGAAGCTGTCCGGGGCGCATGTCAAACTGCACCGCTGCTGCGAGGCCTTCATCTACCTGCTCGCCCCGCTCAGGTCGGTGAGTGTGGAGAAGTGTCGGCGCTGCACGCTGGTGCTGGGCCCGGTGCAGACGACGGTGCATGTGCAGGGCTGCGAGGACGTGCGTGTGGTGTGCGCGGCGGGCCGCCTGTCCGTGGCCGCCTCCTCCTACTGCACCTTCCACCCGCTGACCCCCCGCCGGCCCCTGCTGCTGCCCGGCAACGAGGCCCTGACGCTGGCGCCCTTCCACACGCACTACCCGGCGCTGGAGGACCACATGGCGCGTGCCGGGCTGGCCGTGGTGCCGAGTGCCTGGGACCGGCCCCTGCTGCTGGGCTCCGAGGGCCCGCCCGACAATCCCCCCTTCCGCCTGATGCCCCCCGGCGAGTTCTTTCGGCTGGTGGTGCCCTTCGAGATGGAGGGAGACACCAGCGAGGTGCCGGGCGGCCTGCCCCCTGCGTACCAGAGGGCTGTTGCGGCCCGGGAGCACCGTGTCCAGAGCTGGAGGAAGAGCATCACGGAGGCCAAGCTCAGCAAggACCAGCGGCGCCAGTTGGAGTCTCTGGTGGAGAAGAAGTTCCACGAGTGGCTGCTGGAGTCGGGACACAGGCAGCAGCTGGACAGCCtcatcccccccccacctgaGACCAAACAGGCGGCTGGCTAG

Function

GO: NA

KEGG:

id description
K16810 TBCCD1; TBCC domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000726 True 1689 mRNA 0.70 6 1609083 1611379

Neighbor

gene id symbol gene type direction distance location
AMCG00000727 rab5b,LOC108266395,LOC108430508,LOC107551955,LOC107738511,LOC100697826,LOC107598172,LOC107698530 coding downstream 9408 1594817 ~ 1599675 (-)
AMCG00000728 NA coding downstream 19690 1578799 ~ 1589393 (-)
AMCG00000721 NA coding downstream 97936 1510456 ~ 1511147 (-)
AMCG00000720 idh1 coding downstream 98892 1507301 ~ 1510191 (-)
AMCG00000718 NA coding downstream 138638 1468697 ~ 1470445 (-)
AMCG00000732 satb2 coding upstream 86834 1698213 ~ 1704869 (-)
AMCG00000742 NA coding upstream 206084 1817463 ~ 1822204 (-)
AMCG00000744 NA coding upstream 230269 1841648 ~ 1843356 (-)
AMCG00000743 NA coding upstream 232268 1843647 ~ 1843889 (-)
AMCG00000740 NA coding upstream 234930 1846309 ~ 1863624 (-)
G125845 NA non-coding downstream 31737 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 280435 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 289270 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 301730 1269231 ~ 1307353 (-)
G125642 NA non-coding downstream 721607 887154 ~ 887476 (-)
G125875 NA non-coding upstream 210873 1822252 ~ 1827742 (-)
G126005 NA non-coding upstream 816562 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 849336 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 946612 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1939461 3550840 ~ 3552977 (-)
AMCG00000719 NA other downstream 108422 1478740 ~ 1500661 (-)
G125814 NA other downstream 186673 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 296675 1307821 ~ 1312408 (-)
AMCG00000687 map2 other downstream 1364906 194644 ~ 244177 (-)
AMCG00000731 NA other upstream 150650 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 218165 1829544 ~ 1831310 (-)
G126017 NA other upstream 840489 2451868 ~ 2457883 (-)
G126089 NA other upstream 1425552 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 1432788 3044167 ~ 3050016 (-)

Expression


Co-expression Network