AMCG00000740


Basic Information

Item Value
gene id AMCG00000740
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1846309 ~ 1863624 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000740
gagagagagagagagaggcaggcacGGACAGAAAGACACGGAGCAGCGATGGGACTCGCCGCAGCCGCGCTGTACGGCGGTGTGCTGGCGCTGCTGGGCGCCGCGCTGCGGGAGGTGCTGCTCGGGTACGAGGACAACCGGTGCAGCATGACGTACATGTTCGAGAACCCCGAGTACCTGCGTGTCCAGATGCCACGGCGAGTGTCGCAGCGCTACCCCGGTTACAGGCTGTTCCTGTACGGCGAGGGTTTATACGCTGAGCAGAGCCGCAGCCTGAAGCTCAGCGGTGCCCCCGTGCTGTTCCTCCCCGGGAACGCAGGCAGCTACAAGCAAGCGCGCTCCCTGGGCTCCGTGGCGCTGCGCAAGGCCGAGGACCTGGACGGTCGGCTGCACCTGGACGTGTTCACGGTGGACTTCGGCGAGGAGCTGGTGGCGCTGTACGGAGGGAGCCTGCAGAGACAGACGCGCTTCGTCCACGAGAGCATCAGAGCCATCCTGCGCCTGTACCGGGACCTGGACGCCCCCCCGCGCAGTGTGGCTGTGGTGGGTCACTCCATGGGGGGCATCGTGGCGCGCGCCCTCTTCACCCTGCCCAGGTTCAGCCCCCCCATCGTCAGCCTCATCCTCACCCAGGCCAGCCCCCACCAGGGCCCTGTGCTGCCCCTGGACTCCCACCTGCTGgACTTCTACTCCTCAGTGGGGCAGCGCTGGTCTGCGGGGGGGCGGGATTTGCGCAACGTCACCGTTTTGTCCGTGGGGGGCGGTTACCGTGACTACCAGGTGCGCTCCGGCCTCACcgccctgccctgcccccccGACGACCCCAACAAGCTCTCCCTCGTGAGCACAGCAGTGCCTAGGACCTGGATGTCCACTGACCACCTCTCCATCGTCTGGTGTAAGGAGCTGGTGCTGGCCACAGTCAGGGCGTTCTTTGACCTCCTTGACCCCGACACTCACCAGATGACGGAGGACCCGGTGCGCAGGATGGCCGTCCTCAGGCACCACTTCGTCAGACACCCAGTGCGGCTGCTGTCTGAGCTGGACAACCCGGCCCTGTCGCCGTCTGCGTCTGCCTCTGTCTCCTTCTCCGgctccTCTGGGTCATGGATGGAGGTCCGCACGCCCAGACTGTCCTACAGCAGCCCCAAGGAACCCAGAGTACAATATTTCATCTTCCCGCTTTCAAGTCGCAGAAGAAACTACAGTCACTTCCACTGCCAGAACAGCAACCTGGAGATGACGCCCTGGCTGTTCGGCTGCACCGAGACTAACGGCTCTGTGTGTCTGCAGGGCATGGATCTGTCCTGGGCAACGGAGCTGCTGCCAGCCTTCAAGGTTGCGACAGTGAGACTCGGTGACCTGCCTGCCGTCTCCCACCTGGTCCTCGGCGTCTCCAACCTCAGCGGCAGACAGTTCAGTGTGGAGTGTGAGTGGCTGAGCGAGGACGCCAGGACGGTCGCTGTCCCCATCCCTCACGTCCTGTCCTTCGGGCTGTCCGTCAGTGCGGTGACCCTGAGCTCCGCTGGTCTTCTCCACACCGTGCAGCTGCAGGATTTCCACCAGgTCTACCAGGCTTTTAAAATCACCGTTGAGAGTCAGTGCAAGGGAACCAAAGAGAGGCTGCCCAGTGTGTCCCGACTGACCGTGCCCTGGTTCCGGGAGGACTCCTTCACAACCATGAGtgtgccCTCGGCCACGCAGATCTTTGTCAAGCTGCACACCAGCCGCCCCGACAACTCCTCCAGCGCCGCTCTGCAGCTCCACACCGCCCCCGACTGCCAATACAAGgtgtcTGTGCAGACCTCCTTCCTGCAGGTGCTGGGACAGgtGCTGCGTTTCTGTGGCCCGGTGCTGCCCGTGTACATGGCGGTCAGTGTGCTGCTGCCCTGCGAGGGACAGCTGCTCTCCCTCCTGCACTCAGGCCGTCCCATGGAGATGTCTGAGACCCTGGGAGGAGCTGCCCGGCTCTACAGAGTGGAGCTGCTGGCCTCACTGCTGCACCTGCTGCTCAGgcTGAGCTGGTTCCAGGCAGGCTGGTCTACTCTGGGGCTCCCCCCGGTGGACGCTCTGCCCCTGCTGGCCCCGGACGTGGGTGCGCCCCCTGTCCCCGAGCCCCTGAGCCCTGCGGAGGGCTGGACGCGGCCggtcttgctgctgctgctgttgctgggCGCGGCTGTGGCGTTCTGGGGGGGAGCCCTGATCCGCCTGGCCCTGCGGCTGCTGGCCCTGTTGCTGGGGCCCCTGCACAGGCCCTGTGTCGACCCAGAGAGCTGGCACCTGGGCTTCCGCACGCAGATGGCGCTGAGCCTCACTCTGGGCATTGTTGCTTGGGCTACTTGCGGGGCGCTCGCCCTTGCCACCGTCTACCTGCTGTACCTGTACAAGGCTCCCCAACAGACAGCCACCCCAGCAGGCGGCGGTGAGGTGGGGGGGCCGCAGCAGGGGCAGGGGGGGTGTAATGGCGTCCCTCTGTTGACGGTGTCGGCGCTGGAGGAAGTGCAAGACAATCTGAGGCTGCAGCTCAGCCTGTCCAGCCTGCTGGCCCCCCCCGCGCTGCTCGCCGCCCCCTCCCTCATACACTGGCTCCGGCGGCTCAGGTAA

Function

GO: NA

KEGG:

id description
K05294 PGAP1; GPI inositol-deacylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000740 True 2607 mRNA 0.66 24 1846309 1863624

Neighbor

gene id symbol gene type direction distance location
AMCG00000743 NA coding downstream 2420 1843647 ~ 1843889 (-)
AMCG00000744 NA coding downstream 2953 1841648 ~ 1843356 (-)
AMCG00000742 NA coding downstream 24105 1817463 ~ 1822204 (-)
AMCG00000732 satb2 coding downstream 141440 1698213 ~ 1704869 (-)
AMCG00000726 NA coding downstream 234930 1609083 ~ 1611379 (-)
AMCG00000739 NA coding upstream 2798 1866422 ~ 1869208 (-)
AMCG00000751 NA coding upstream 205551 2069175 ~ 2072395 (-)
AMCG00000754 NA coding upstream 217752 2081376 ~ 2090447 (-)
AMCG00000757 NA coding upstream 228079 2091703 ~ 2091968 (-)
AMCG00000756 LOC107709571 coding upstream 235306 2098930 ~ 2120759 (-)
G125875 NA non-coding downstream 18567 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 268963 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 517661 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 526496 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 538956 1269231 ~ 1307353 (-)
G126005 NA non-coding upstream 564317 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 597091 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 694367 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1687216 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 1810657 3674281 ~ 3676927 (-)
AMCG00000741 gtf3c3,LOC104966512 other downstream 14999 1829544 ~ 1831310 (-)
AMCG00000731 NA other downstream 75284 1762029 ~ 1771025 (-)
AMCG00000719 NA other downstream 345648 1478740 ~ 1500661 (-)
G125814 NA other downstream 423899 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 533901 1307821 ~ 1312408 (-)
G126017 NA other upstream 588244 2451868 ~ 2457883 (-)
G126089 NA other upstream 1173307 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 1180543 3044167 ~ 3050016 (-)
G126096 NA other upstream 1268090 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other upstream 1270252 3133876 ~ 3140489 (-)

Expression


Co-expression Network