AMCG00000745


Basic Information

Item Value
gene id AMCG00000745
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1943648 ~ 1945167 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000745
ATGTACCTTCTGGACGGCGATTTCCCCGACAGGATGGACAGGGGGACCCCGCAACGCAAGACCGTGTACCGGATCTCTCTCACGCTGGTGAAGAAGGAGAGTTTGCCGGAGggaggcggcggcggcggcggcttGGCGCACCGGCGTCTGGAGAACCCCAAGCCGGGAGCTCACCGGCGAGAGGGCGCCTCTGAGATCCAGCGCAGCTGCCTgctggaagaggaggaagagggggacgAGAGCGACGACTTCTCGGCGCAGAACTACCTGCGCAACTTCAGGACGTTCAGCACCGGCCACCTGGAGCTGGGCCGGCTGAAGATCTCCAGGAAGACGCACCACTTCCACAAGGACCTATCGTTCAAGGTCCGGGAGGCCGGCACGGCCGGCGCGGCGGGAGCAGGTGAGCCTGCGGGGGACAGCGGCCCGGGTCGCCCGGCCAGTATGGTCGCCTCTCTGAACGTGGCGTTGCAGAACAGGAAGAACTGCTCTGCAGGTTCGGGGTCCCCCTCCCTGGCCCCCAAGGCAGCCGGTAAAGCGGGCAAGCCGGTTCCACAGACCCCTCCGCTCAAGAGGCACCCCAGCCTGCTGAGGAGGAGCTTCAGCTTCAGGCATTGGACAGGCGGGGAGCTGTTGCGCATCCGGGCCCTGACCCGGGAGAAGCACCACAACAGCTCCAGCTGTCTGGGCCAAGACCAGGGCCCGGACCCGGGGGCGGTGGTCCTACAGAACCCGGCCTTCGAGGAGTCCGGCGGTAGCGAGAAGAGGAACACGCTGGACGTGGGCGAGGTGCTGAACAAGACGGACTCCCTGACCGAGCTGAGCCGCTGGGACCGGGCCAAGGGCAAGAACCGCACCCTGGACAACAGCGACCTGCACCGGCTCTCTGAGAAGAGCCTGGAAGACAAGGAGAGCTTCCTGCGGGGCGGGGGGGCGCGGTCCAGCGGCCAGGAGCGCCGGCTGCTGCGCTTCTTCAGTGGCATCTTCTCCAAGAAGGACGGTACCTCCACACCGGTCAGCAGCCCCAGCGGCCGCTCCCTCAGGGACACCAAGAGGGGCCTGCTGGGCTCGGCCAAGAGGGCGGCGCTGGGGGGCTCCCAGTCCAGCACAGAGAGCGTCAACGGCTCTCCACTGAAGGgTGGATCTCaggtgtgcgtgcgtgtgtgtgtgtgcgtttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000745 True 1179 mRNA 0.67 3 1943648 1945167

Neighbor

gene id symbol gene type direction distance location
AMCG00000733 rpe,LOC106919839,LOC103134215,LOC108239723,LOC101467395,LOC102796346,LOC100692108 coding upstream 54483 1885580 ~ 1889165 (+)
AMCG00000735 vps16,LOC101164202,LOC106575790 coding upstream 58563 1874998 ~ 1885085 (+)
AMCG00000736 NA coding upstream 69956 1869579 ~ 1873692 (+)
AMCG00000737 NA coding upstream 112898 1824869 ~ 1830750 (+)
AMCG00000738 NA coding upstream 145217 1792408 ~ 1798431 (+)
AMCG00000750 NA coding downstream 19864 1965031 ~ 1969537 (+)
AMCG00000748 agap1,LOC108272907 coding downstream 30222 1975389 ~ 1978780 (+)
AMCG00000749 agap1 coding downstream 41921 1987088 ~ 1993395 (+)
AMCG00000747 agap1,LOC106575763,LOC101478076 coding downstream 63595 2008762 ~ 2024346 (+)
AMCG00000746 NA coding downstream 89675 2034842 ~ 2037990 (+)
G125756 NA non-coding upstream 321760 1617808 ~ 1621888 (+)
G125767 NA non-coding upstream 334438 1594823 ~ 1609210 (+)
G125736 NA non-coding upstream 516705 1426633 ~ 1426943 (+)
G125713 NA non-coding upstream 615009 1323503 ~ 1328639 (+)
G125684 myo1b non-coding upstream 636313 1304095 ~ 1307335 (+)
G125955 NA non-coding downstream 346668 2291835 ~ 2293872 (+)
G125986 NA non-coding downstream 482503 2427670 ~ 2520585 (+)
G126036 NA non-coding downstream 612825 2557992 ~ 2558257 (+)
G126044 NA non-coding downstream 821088 2766255 ~ 2766539 (+)
G126050 NA non-coding downstream 925749 2870916 ~ 2885184 (+)
AMCG00000734 NA other upstream 129491 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 245075 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 337617 1599696 ~ 1606031 (+)
G125561 NA other upstream 1540057 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 3516134 5461301 ~ 5465981 (+)
G127134 NA other downstream 6672032 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 8155116 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 10054497 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 10343783 12288950 ~ 12385042 (+)

Expression


Co-expression Network