AMCG00000751


Basic Information

Item Value
gene id AMCG00000751
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2069175 ~ 2072395 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000751
ATGAGTGCAGCCTTCAGCCCGTCGCTGATGATGATGCAGCGCCCGTTGGGAAGCACCACAGCCTTCAGCATCGACTCCCTCATCGGGGGTCCTCCGCAGCCCAGCCCGGGACACTTCGTGTACACCGGCTACCCCATGTTCATGCCCTACCGGCCGGTGGTGCTGCCTCCGCCGCCCCCTCCGCCGCCCACCCTGCCCCCCGCGCACCCGCACCACCAGATCCCCAGCCTGCCCGGCTCCTTCTGCTCCAGCCTGGCGCAGGGCATGGCGCTCACGTCCACCCTCATGGCCACCCTGCCCGGCGGCTTCTCGGCCTCTCCGCAGCACCAGGAGGCGGCCAGGAAGTTCGGCTCGCAGTCCCTGCAGGCCGTGTTTGACAAGCCGGAGGACAGCCGGCAGGACGGGGACGAGGGCAAGACGTTTCTGGGCAAAGACGCGCCGGGGCTGCCGCCGTTTCCAGCGTCCGAGGCCGGGCAGCCGTCCATAGCCAGGGCTCAGGGCAAGGAGGACGGCAAGGAAGACGAGCCCTCCAGGAAAGACGAGAGCTTCTCAATAATGGACAGCGACCTGGACTACAGCTCGGACGACAACGGGGCCGGACAGGGCCTATCGTGGTGCCCATCCCGGTGCACGTCAGCCGCTTTGCCATCAGGAGTCAGCACCAACAGCTGGAGCAGGCCCGGCCCTGACCCGCCCGCCCGCCTGGCACGGACTGGCACGGACTGGCACACGGACCTCTAA

Function

GO:

id name namespace
GO:0030902 hindbrain development biological_process
GO:0003677 DNA binding molecular_function

KEGG:

id description
K09321 GBX; homeobox protein GBX

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000751 True 741 mRNA 0.68 3 2069175 2072395

Neighbor

gene id symbol gene type direction distance location
AMCG00000739 NA coding downstream 199967 1866422 ~ 1869208 (-)
AMCG00000740 NA coding downstream 205551 1846309 ~ 1863624 (-)
AMCG00000743 NA coding downstream 225286 1843647 ~ 1843889 (-)
AMCG00000744 NA coding downstream 225819 1841648 ~ 1843356 (-)
AMCG00000742 NA coding downstream 246971 1817463 ~ 1822204 (-)
AMCG00000754 NA coding upstream 8981 2081376 ~ 2090447 (-)
AMCG00000757 NA coding upstream 19308 2091703 ~ 2091968 (-)
AMCG00000756 LOC107709571 coding upstream 26535 2098930 ~ 2120759 (-)
AMCG00000755 NA coding upstream 61087 2133482 ~ 2144637 (-)
AMCG00000759 NA coding upstream 190273 2262668 ~ 2326605 (-)
G125875 NA non-coding downstream 241433 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 491829 1575361 ~ 1577346 (-)
G125719 NA non-coding downstream 740527 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 749362 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 761822 1269231 ~ 1307353 (-)
G126005 NA non-coding upstream 355546 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 388320 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 485596 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1478445 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 1601886 3674281 ~ 3676927 (-)
AMCG00000741 gtf3c3,LOC104966512 other downstream 237865 1829544 ~ 1831310 (-)
AMCG00000731 NA other downstream 298150 1762029 ~ 1771025 (-)
AMCG00000719 NA other downstream 568514 1478740 ~ 1500661 (-)
G125814 NA other downstream 646765 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 756767 1307821 ~ 1312408 (-)
G126017 NA other upstream 379473 2451868 ~ 2457883 (-)
G126089 NA other upstream 964536 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 971772 3044167 ~ 3050016 (-)
G126096 NA other upstream 1059319 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other upstream 1061481 3133876 ~ 3140489 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031940 gbx2 coding NC_007117.7 CM002890.2 16031189 ~ 16034286 (+)